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NC_023498.1__YP_009002747.1__CC50_gp014__00096
Bact-VirNC_023498.1__YP_009002747.1__CC50_gp014__00096
Identity
- Accession:
- NC_023498 ↗
- Kingdom:
- phage
Quality
77.5
mean pLDDT
Taxonomy
TaxID: 1414747
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-89
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.85 | 65.0 | 6.09e-01 | 100.0% | 67.5% |
| 5z8lA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.73 | 66.0 | 5.30e-01 | 100.0% | 63.0% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.70 | 63.0 | 4.77e-01 | 100.0% | 52.3% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.70 | 59.0 | 4.38e-01 | 100.0% | 36.6% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 54.0 | 5.88e-01 | 93.8% | 98.1% |
| 3e1sA04 | 2.30.30.940 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 56.0 | 5.44e-01 | 100.0% | 79.7% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 60.0 | 5.83e-01 | 98.4% | 85.7% |
| 1ub4A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 58.0 | 4.92e-01 | 100.0% | 74.8% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 51.0 | 5.09e-01 | 100.0% | 93.8% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 51.0 | 4.96e-01 | 100.0% | 87.3% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 51.0 | 4.98e-01 | 100.0% | 86.3% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 49.0 | 4.65e-01 | 100.0% | 75.6% |
| 3hl8A02 | 3.30.1520.20 | Alpha Beta › 2-Layer Sandwich › PX Domain › Exonuclease ExoI, domain 2 | 0.60 | 53.0 | 4.17e-01 | 100.0% | 62.7% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 52.0 | 4.79e-01 | 100.0% | 75.0% |
| 6b9tF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 46.0 | 3.91e-01 | 87.5% | 93.6% |
| 8dtpC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 46.0 | 3.21e-01 | 93.8% | 91.7% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 47.0 | 3.05e-01 | 96.9% | 32.0% |
| 3qdfA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.56 | 44.0 | 4.61e-01 | 98.4% | 94.8% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 45.0 | 3.56e-01 | 100.0% | 61.7% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 3.36e-01 | 100.0% | 64.0% |
| 1zuoB00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.52 | 43.0 | 3.45e-01 | 96.9% | 80.0% |
| 2wgoA00 | 3.10.450.260 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 42.0 | 3.81e-01 | 96.9% | 82.7% |
| 4e9kA00 | 2.60.120.1350 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 | 0.52 | 36.0 | 2.52e-01 | 75.0% | 27.9% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 43.0 | 3.29e-01 | 98.4% | 68.7% |
| 1sefA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 40.0 | 3.24e-01 | 89.1% | 77.9% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4956443 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 62.0 | 6.45e-01 | 100.0% | 90.0% |
| 3247995 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.75 | 57.0 | 5.51e-01 | 100.0% | 72.9% |
| 3348456 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.75 | 62.0 | 6.41e-01 | 100.0% | 93.3% |
| 3820066 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 62.0 | 6.41e-01 | 100.0% | 93.3% |
| 3819340 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.74 | 61.0 | 4.84e-01 | 100.0% | 46.7% |
| 3354076 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.74 | 69.0 | 5.31e-01 | 100.0% | 52.3% |
| 3407915 | 4.1.3.2 ↗ | beta barrels › SH3 › SH3 › Calcium-binding protein CcbP › SHCBP_N | 0.72 | 66.0 | 5.04e-01 | 100.0% | 49.3% |
| 2426920 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.72 | 57.0 | 6.02e-01 | 100.0% | 96.4% |
| 598 | 4.1.1.68 ↗ | beta barrels › SH3 › SH3 › SH3 › YorP | 0.71 | 59.0 | 5.73e-01 | 100.0% | 80.3% |
| 3607981 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 65.0 | 6.20e-01 | 100.0% | 86.5% |
| 3828371 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.69 | 61.0 | 5.53e-01 | 100.0% | 71.8% |
| 3712672 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 62.0 | 5.73e-01 | 98.4% | 97.5% |
| 3937006 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 60.0 | 5.67e-01 | 98.4% | 91.0% |
| 3497234 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 61.0 | 4.50e-01 | 100.0% | 50.3% |
| 3373298 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 59.0 | 3.92e-01 | 100.0% | 25.4% |
| 3970000 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 60.0 | 5.20e-01 | 100.0% | 69.0% |
| 3672652 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.67 | 60.0 | 4.99e-01 | 100.0% | 73.6% |
| 3341617 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.67 | 59.0 | 3.95e-01 | 100.0% | 32.0% |
| 3926430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 53.0 | 5.49e-01 | 100.0% | 93.3% |
| 3396594 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 53.0 | 5.53e-01 | 100.0% | 93.3% |
| 3579728 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 56.0 | 5.48e-01 | 96.9% | 84.3% |
| 3215500 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 50.0 | 5.39e-01 | 96.9% | 96.4% |
| 3806777 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 58.0 | 5.50e-01 | 100.0% | 85.3% |
| 157818 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.64 | 54.0 | 4.79e-01 | 96.9% | 64.8% |
| 3782292 | 4.1.1.170 ↗ | beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind | 0.63 | 58.0 | 5.35e-01 | 100.0% | 85.0% |
| 3725153 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.63 | 51.0 | 4.78e-01 | 100.0% | 71.2% |
| 3323474 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.63 | 54.0 | 4.86e-01 | 100.0% | 68.9% |
| 3576235 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 58.0 | 5.46e-01 | 100.0% | 86.7% |
| 3181731 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.63 | 55.0 | 3.77e-01 | 98.4% | 53.5% |
| 3186866 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.63 | 55.0 | 3.77e-01 | 100.0% | 49.8% |
| 4014359 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.62 | 54.0 | 3.66e-01 | 96.9% | 49.8% |
| 1120986 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.62 | 50.0 | 5.01e-01 | 100.0% | 89.6% |
| 3863382 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 50.0 | 4.88e-01 | 100.0% | 84.3% |
| 3422210 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.62 | 55.0 | 4.12e-01 | 100.0% | 90.6% |
| 3955562 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.62 | 55.0 | 4.69e-01 | 100.0% | 78.1% |
| 3911248 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.61 | 55.0 | 4.89e-01 | 100.0% | 93.3% |
| 3941573 | 4.1.1.413 ↗ | beta barrels › SH3 › SH3 › SH3 › Exonuc_X-T_C | 0.60 | 53.0 | 4.14e-01 | 100.0% | 64.3% |
| 3653322 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.59 | 51.0 | 3.58e-01 | 100.0% | 73.2% |
| 3879232 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.58 | 50.0 | 3.33e-01 | 100.0% | 63.9% |
| 4093378 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 50.0 | 4.67e-01 | 100.0% | 87.5% |
| 3221009 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.57 | 48.0 | 3.39e-01 | 93.8% | 39.7% |
| 3812263 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.55 | 46.0 | 3.89e-01 | 100.0% | 74.2% |
| 3706361 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 47.0 | 3.83e-01 | 100.0% | 86.4% |
| 5034832 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 45.0 | 4.44e-01 | 100.0% | 92.9% |
| 3601025 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.53 | 44.0 | 3.41e-01 | 98.4% | 52.7% |
| 4989823 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.53 | 41.0 | 2.91e-01 | 93.8% | 80.8% |
| 3895174 | 206.1.1.76 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1, Pkinase_fungal | 0.51 | 43.0 | 2.79e-01 | 100.0% | 29.6% |
| 4108055 | 9.1.1.9 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeT | 0.51 | 41.0 | 2.98e-01 | 93.8% | 92.0% |
| 3997946 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.51 | 42.0 | 3.12e-01 | 95.3% | 37.2% |
| 3559120 | 220.1.1.173 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK | 0.51 | 38.0 | 3.28e-01 | 87.5% | 81.7% |