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NC_023502.1__YP_009003224.1__CC53_gp067__00067
Bact-VirNC_023502.1__YP_009003224.1__CC53_gp067__00067
Identity
- Accession:
- NC_023502 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-154
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.76 | 49.0 | 5.84e-01 | 75.0% | 98.6% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.71 | 46.0 | 4.45e-01 | 75.0% | 58.7% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.69 | 47.0 | 4.48e-01 | 75.0% | 59.5% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.69 | 47.0 | 4.86e-01 | 76.9% | 75.8% |
| 3gp4B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.65 | 44.0 | 4.15e-01 | 74.1% | 56.9% |
| 4lhfA00 | 6.10.200.10 | Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox | 0.58 | 34.0 | 3.88e-01 | 73.1% | 78.5% |
| 5ubvA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 35.0 | 4.08e-01 | 73.1% | 97.2% |
| 3whkA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 35.0 | 4.12e-01 | 85.2% | 100.0% |
| 2x8aA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 36.0 | 3.99e-01 | 85.2% | 95.0% |
| 2bjfA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.51 | 36.0 | 2.60e-01 | 73.1% | 80.8% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281871 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.74 | 49.0 | 4.73e-01 | 73.1% | 60.0% |
| 3945289 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.74 | 49.0 | 4.64e-01 | 75.0% | 57.6% |
| 3280706 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.74 | 48.0 | 5.47e-01 | 72.2% | 88.7% |
| 4548007 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.73 | 44.0 | 4.85e-01 | 76.9% | 75.3% |
| 3948487 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.71 | 47.0 | 4.41e-01 | 74.1% | 54.1% |
| 3966930 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.71 | 47.0 | 4.72e-01 | 76.9% | 66.4% |
| 3976015 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.71 | 46.0 | 5.19e-01 | 73.1% | 88.7% |
| 4101677 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.71 | 49.0 | 4.55e-01 | 78.7% | 57.0% |
| 3587879 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.71 | 47.0 | 4.71e-01 | 76.9% | 66.4% |
| 3284505 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.70 | 47.0 | 4.66e-01 | 77.8% | 64.3% |
| 3281256 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.69 | 43.0 | 4.83e-01 | 78.7% | 82.5% |
| 4061721 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.69 | 47.0 | 4.43e-01 | 75.0% | 57.7% |
| 3589130 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.69 | 37.0 | 4.80e-01 | 88.0% | 100.0% |
| 3976170 | 101.1.9.26 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like | 0.68 | 43.0 | 5.13e-01 | 80.6% | 98.6% |
| 3954117 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.68 | 42.0 | 4.70e-01 | 83.3% | 80.0% |
| 3948248 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 40.0 | 4.91e-01 | 88.9% | 100.0% |
| 4334333 | 101.1.9.1 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind | 0.66 | 47.0 | 4.28e-01 | 92.6% | 56.4% |
| 3586960 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.66 | 45.0 | 4.79e-01 | 77.8% | 81.1% |
| 3284686 | 101.1.9.84 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 | 0.65 | 48.0 | 3.78e-01 | 100.0% | 36.5% |
| 3953197 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.61 | 42.0 | 4.45e-01 | 70.4% | 100.0% |
| 5067203 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 36.0 | 4.21e-01 | 73.1% | 92.9% |
| 3203041 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.59 | 43.0 | 4.47e-01 | 81.5% | 84.0% |
| 3370313 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.58 | 32.0 | 2.76e-01 | 86.1% | 35.2% |
| 3232045 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.57 | 39.0 | 4.23e-01 | 87.0% | 85.2% |
| 4932596 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.54 | 36.0 | 3.97e-01 | 86.1% | 88.2% |
| 4999188 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.53 | 38.0 | 4.22e-01 | 85.2% | 100.0% |
| 3403797 | 10.12.1.97 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C | 0.52 | 40.0 | 3.36e-01 | 82.4% | 96.8% |