Back to structures

NC_023502.1__YP_009003278.1__CC53_gp121__00121

Bact-Vir

NC_023502.1__YP_009003278.1__CC53_gp121__00121

Identity

Accession:
NC_023502 ↗
Kingdom:
phage

Quality

79.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-62
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1f0lA02 1.10.490.40 Mainly Alpha › Orthogonal Bundle › Globin-like › Diphtheria toxin, translocation domain 0.69 53.0 3.77e-01 84.7% 29.9%
5z7rA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.66 42.0 4.46e-01 78.0% 73.1%
3nrtA00 6.20.350.10 Special › Other non-globular › Actin; Chain A, domain 4 › 0.66 50.0 4.35e-01 83.1% 80.6%
4g6dB02 6.10.140.1800 Special › Helix non-globular › Helix Hairpins › 0.62 43.0 3.84e-01 72.9% 84.0%
3m9lA02 1.10.260.80 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.60 43.0 4.61e-01 78.0% 86.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3599717 3193.1.1.0 alpha arrays › HopAB effectors Pto-binding domain-related › HopAB effectors Pto-binding domain-related › HopAB effectors Pto-binding domain-related 0.68 58.0 4.50e-01 93.2% 93.6%
3880744 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 46.0 2.98e-01 74.6% 16.5%
5069661 632.2.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.64 51.0 4.38e-01 84.7% 72.2%