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NC_023575.1__YP_009007071.1__CF86_gp04__00004

Bact-Vir

Identity

Accession:: NC_023575 ↗
Kingdom:: phage

Quality

86.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_vB_PaeP_Tr60_Ab31

TaxID: 1449437

Cluster

View cluster (78 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-53_154-270

PDB

Domain cluster: rep: IMGVR_UViG_3300012211_000009-3300012211-Ga0137377_1000030636__D15-67_146-276

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12236.15 best	Head-tail_con	104.5	7.00e-30	70.0%	23.7%
PF12236.15	Head-tail_con	34.0	1.70e-08	30.0%	9.6%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1tkeA03	3.30.54.20	Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 ›	0.66	23.0	3.92e-01	76.5%	93.1%
1ye9A02	2.40.470.10	Mainly Beta › Beta Barrel › catalase hpii fold › catalase hpii domain	0.56	29.0	3.55e-01	91.8%	75.9%
3vygD00	2.30.30.50	Mainly Beta › Roll › SH3 type barrels. ›	0.55	24.0	2.86e-01	84.7%	55.5%
4irzA01	2.130.10.130	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal	0.52	44.0	3.29e-01	91.8%	98.2%
3i9v700	3.30.920.80	Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15	0.51	29.0	3.36e-01	80.6%	73.2%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3076016	4056.1.1.4 ↗	beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con	0.72	47.0	5.64e-01	84.7%	96.6%
3110784	4056.1.1.4 ↗	beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con	0.67	43.0	5.13e-01	84.7%	91.7%
2537708	4056.1.1.4 ↗	beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con	0.65	46.0	5.16e-01	87.1%	92.5%

D2 medium residues 54-153_385-461

PDB

Domain cluster: rep: OQ414635.1__WDQ27532.1__EXVC032PBaldr_011__00011__D70-152_369-443

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12236.15 best	Head-tail_con	80.7	1.10e-22	57.6%	20.4%
PF12236.15	Head-tail_con	59.3	3.40e-16	45.2%	13.7%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2f2cA02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.58	28.0	3.56e-01	83.1%	75.5%
5ck3C00	3.30.450.60	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase ›	0.58	23.0	2.90e-01	74.6%	56.2%
6j09A02	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.56	25.0	3.56e-01	85.3%	91.0%
4hqeA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	19.0	2.46e-01	81.4%	53.3%
1u5tB01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	23.0	3.15e-01	72.9%	83.5%
5uayA01	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.51	22.0	3.03e-01	88.1%	81.7%
2qdfA02	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.50	24.0	3.18e-01	87.0%	88.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3318217	263.1.1.1 ↗	a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF	0.71	20.0	3.09e-01	88.1%	56.2%
3209804	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.58	25.0	2.73e-01	77.4%	44.1%

D3 medium residues 275-374

PDB

Domain cluster: rep: NC_031231.1__YP_009301271.1__BJD78_gp14__00014__D265-367

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12236.15 best	Head-tail_con	69.9	2.20e-19	100.0%	19.8%

CATH (35)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6h9xA01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.79	50.0	4.98e-01	95.0%	62.7%
1zpyA00	6.10.140.1960	Special › Helix non-globular › Helix Hairpins ›	0.76	51.0	5.40e-01	100.0%	75.8%
3nrxA00	1.20.58.1520	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.74	38.0	3.54e-01	95.0%	40.7%
3r84A00	1.10.287.3490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.72	51.0	5.65e-01	94.0%	90.1%
4l0rB00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.70	49.0	5.77e-01	89.0%	100.0%
3fppA03	6.10.140.1990	Special › Helix non-globular › Helix Hairpins ›	0.70	49.0	5.20e-01	94.0%	81.8%
4abmD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.68	50.0	5.67e-01	90.0%	98.7%
3mq1A01	1.20.58.970	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.66	44.0	4.63e-01	90.0%	75.0%
1ykhA00	6.10.140.200	Special › Helix non-globular › Helix Hairpins ›	0.65	45.0	4.59e-01	94.0%	74.7%
1qsdA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.65	49.0	4.91e-01	90.0%	77.5%
3aeiA00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.64	54.0	5.63e-01	89.0%	98.9%
1zkeA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.64	50.0	5.53e-01	98.0%	100.0%
1fxkB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.64	56.0	5.45e-01	94.0%	89.9%
4h63H01	1.20.58.1710	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.63	40.0	4.51e-01	92.0%	87.5%
2xbuA00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.63	33.0	2.58e-01	93.0%	25.5%
3txsC01	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.63	43.0	4.86e-01	93.0%	94.7%
3hr0B01	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.62	47.0	5.20e-01	90.0%	100.0%
4aflA00	6.10.140.1740	Special › Helix non-globular › Helix Hairpins ›	0.62	50.0	5.01e-01	98.0%	83.3%
2v0oB00	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.61	51.0	3.69e-01	94.0%	32.8%
3okqA00	1.20.58.1540	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain	0.61	45.0	4.22e-01	95.0%	62.4%
1yf2A02	1.10.287.1120	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein	0.61	53.0	5.24e-01	95.0%	91.6%
2rd0B00	1.10.287.1490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.61	51.0	4.52e-01	95.0%	64.0%
3aonA00	1.10.287.3240	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.60	53.0	4.27e-01	95.0%	97.9%
7zd5C01	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.60	55.0	3.82e-01	100.0%	37.5%
1o7dC01	1.20.1270.50	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain	0.60	37.0	4.43e-01	94.0%	100.0%
2dq0A01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.60	49.0	4.85e-01	87.0%	84.1%
2zdiB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.59	50.0	4.91e-01	92.0%	100.0%
4mh6A00	1.10.287.1700	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.59	52.0	4.40e-01	95.0%	88.1%
3ajwA00	1.10.287.1700	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.59	52.0	4.69e-01	95.0%	70.9%
7wu7601	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.58	49.0	4.95e-01	90.0%	90.0%
1w9rA00	1.20.58.440	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A	0.57	44.0	4.20e-01	95.0%	69.7%
1nu7D01	1.20.120.750	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle domain 1	0.57	48.0	4.36e-01	91.0%	70.4%
3na7A00	1.10.287.1490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.57	50.0	3.75e-01	95.0%	70.5%
1uruA01	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.57	48.0	3.85e-01	96.0%	45.5%
1np6B01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.54	25.0	2.27e-01	98.0%	27.9%

ECOD (42)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4966910	7518.1.1.6 ↗	a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › DacZ_A	0.70	33.0	3.11e-01	89.0%	38.3%
3358009	192.8.1.0 ↗	alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain	0.68	53.0	5.24e-01	95.0%	77.1%
3947685	4038.1.1.1 ↗	alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal	0.67	59.0	4.57e-01	99.0%	57.3%
3511359	4038.1.1.0 ↗	alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein	0.67	59.0	4.16e-01	99.0%	72.1%
4994900	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.67	59.0	5.45e-01	95.0%	87.2%
4971920	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.66	59.0	5.44e-01	95.0%	98.4%
5038348	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.66	59.0	5.20e-01	95.0%	87.9%
3409778	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.65	58.0	5.26e-01	94.0%	83.8%
4978893	3755.3.1.632 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin	0.65	58.0	5.12e-01	95.0%	77.9%
4941487	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.65	58.0	5.43e-01	95.0%	90.8%
5079691	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.65	58.0	5.22e-01	95.0%	91.1%
4626792	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.65	58.0	5.08e-01	95.0%	75.2%
5073682	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.65	58.0	5.14e-01	95.0%	88.4%
5035139	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.65	57.0	5.09e-01	95.0%	78.4%
3594109	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.65	57.0	4.96e-01	95.0%	77.3%
4532543	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.65	58.0	5.09e-01	95.0%	77.9%
3329453	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.64	57.0	5.00e-01	95.0%	75.2%
4403516	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.64	57.0	5.28e-01	95.0%	98.4%
5027984	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.64	57.0	5.32e-01	95.0%	90.8%
4993906	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.64	57.0	5.02e-01	95.0%	87.9%
3592209	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.64	57.0	5.55e-01	95.0%	98.2%
4945806	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.64	57.0	5.31e-01	95.0%	90.8%
4942428	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.63	56.0	5.04e-01	95.0%	80.7%
3409703	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.63	58.0	5.23e-01	98.0%	85.4%
4661346	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.63	56.0	4.87e-01	95.0%	84.8%
3899656	3758.1.1.0 ↗	alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins	0.61	54.0	3.75e-01	95.0%	57.8%
5022380	3755.3.1.632 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin	0.61	55.0	4.81e-01	95.0%	67.9%
4982168	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.60	52.0	4.80e-01	95.0%	80.8%
3477448	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.60	49.0	4.04e-01	91.0%	87.9%
4392278	604.12.1.9 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2	0.59	50.0	4.23e-01	91.0%	56.8%
3212393	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.59	49.0	4.75e-01	90.0%	100.0%
4479009	601.2.1.5 ↗	alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr	0.59	50.0	4.44e-01	93.0%	65.5%
3717141	4106.1.1.1 ↗	few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC	0.57	50.0	3.80e-01	95.0%	40.4%
3361555	377.1.1.12 ↗	few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C5HC2	0.56	47.0	4.40e-01	90.0%	93.6%
3191834	4207.1.1.1 ↗	alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med21	0.55	48.0	4.34e-01	98.0%	69.3%
3792641	192.8.1.0 ↗	alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain	0.55	45.0	4.69e-01	91.0%	97.8%
4025990	3748.1.1.3 ↗	extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › eIF3h_C	0.54	49.0	4.58e-01	98.0%	80.8%
3247974	601.2.1.5 ↗	alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr	0.54	47.0	4.23e-01	93.0%	68.9%
3236033	3930.1.1.0 ↗	alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase	0.53	46.0	4.01e-01	92.0%	73.1%
3769170	192.2.1.34 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › CpG_bind_C	0.52	45.0	4.28e-01	95.0%	96.7%
3496327	109.4.1.176 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd1,Cnd1_N	0.52	46.0	2.58e-01	98.0%	12.7%
4673395	621.1.1.0 ↗	alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	0.52	45.0	3.34e-01	98.0%	51.6%

D4 medium residues 462-508

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2e9xA01	1.20.58.1030	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.73	58.0	4.32e-01	93.6%	33.6%
4e4eA01	1.10.287.990	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain	0.73	60.0	5.26e-01	93.6%	64.8%
4hwhE00	1.20.58.120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain	0.69	57.0	4.72e-01	95.7%	51.1%
7lwzB01	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.67	51.0	3.44e-01	85.1%	20.7%
1n81A00	1.10.3030.10	Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27	0.62	54.0	3.60e-01	100.0%	65.1%
2p6vA00	1.20.120.1110	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain	0.62	53.0	4.25e-01	100.0%	79.4%
4h0aA00	3.40.33.10	Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP	0.62	45.0	2.76e-01	78.7%	36.3%
3kd3A02	1.10.150.210	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2	0.61	45.0	4.16e-01	100.0%	63.3%
4ywkA01	3.30.1640.10	Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1	0.58	41.0	3.36e-01	93.6%	38.1%
3dteA02	1.10.10.1030	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain	0.54	35.0	3.72e-01	91.5%	70.7%
2pmyA00	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.52	42.0	3.62e-01	87.2%	100.0%
3wgtA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.50	36.0	2.48e-01	78.7%	20.2%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5044936	159.1.2.0 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related	0.68	57.0	4.68e-01	100.0%	49.5%
3280288	5011.1.1.0 ↗	extended segments › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa	0.67	51.0	5.23e-01	93.6%	93.3%
3574338	101.1.21.0 ↗	alpha arrays › HTH › HTH › HTH in T7 RNA polymerase	0.56	46.0	2.95e-01	95.7%	19.2%
2554	101.1.1.13 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1	0.56	43.0	3.67e-01	93.6%	79.8%
4939992	298.2.1.1 ↗	a+b two layers › FwdE/GAPDH domain-like › FwdE-like › FwdE-like › FmdE	0.53	39.0	2.79e-01	85.1%	58.8%

D5 medium residues 512-548

PDB

Domain cluster: representative