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NC_023575.1__YP_009007085.1__CF86_gp18__00018

Bact-Vir

Identity

Accession:: NC_023575 ↗
Kingdom:: phage

Quality

87.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_vB_PaeP_Tr60_Ab31

TaxID: 1449437

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-298_300-379

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01757.29 best	Acyl_transf_3	100.0	2.00e-28	88.1%	99.1%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2x0cA01	1.20.1420.10	Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain	0.63	25.0	3.52e-01	77.5%	72.5%
1b68A00	1.20.120.20	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein	0.61	25.0	3.97e-01	77.2%	97.1%
8sbeA01	1.20.1250.20	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains	0.57	26.0	3.46e-01	82.4%	76.0%
2zy9A03	1.10.357.20	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain	0.56	22.0	3.11e-01	91.3%	71.8%
3behB01	1.20.120.540	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels	0.54	20.0	3.39e-01	92.1%	98.3%
5eroA00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.52	28.0	3.11e-01	76.7%	61.5%
4iu9B02	1.20.1250.20	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains	0.51	26.0	3.44e-01	84.8%	86.2%
3ihuA02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.51	18.0	2.86e-01	98.6%	78.4%
3cegA00	3.10.110.10	Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme	0.50	23.0	2.62e-01	98.9%	52.7%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3241047	3281.1.2.4 ↗	alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related › Acyl_transf_3	0.91	80.0	8.41e-01	98.6%	98.2%
3210888	3281.1.2.4 ↗	alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related › Acyl_transf_3	0.87	83.0	8.38e-01	97.6%	99.5%
3799497	129.1.1.24 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Acyl_transf_3	0.79	70.0	6.80e-01	90.0%	95.7%
3492784	5069.1.1.59 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Acyl_transf_3	0.78	70.0	7.09e-01	92.1%	98.9%
3648349	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.68	49.0	5.73e-01	86.2%	100.0%
4110389	129.1.1.24 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Acyl_transf_3	0.66	59.0	5.99e-01	93.8%	99.2%
3723233	5050.1.1.12 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › TRI12	0.54	27.0	3.21e-01	99.5%	65.9%
4999398	1075.5.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE	0.53	28.0	3.35e-01	70.5%	71.8%
4238557	1188.1.1.3 ↗	alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Mntp	0.53	25.0	3.45e-01	83.7%	88.3%
3608521	5050.1.1.4 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nucleoside_tran	0.52	27.0	3.25e-01	84.0%	69.8%

D2 high residues 393-631

PDB

Domain cluster: rep: ON778006.1__UVD41309.1__X__00012__D14-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19040.7 best	SGNH	54.5	1.90e-14	93.3%	87.9%