NC_023584.1__YP_009007895.1__S-MbCM100_038__00038

Bact-Vir

Identity

91.2 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Acionnavirus› Synechococcus_phage_S-MbCM100

TaxID: 1340812

View cluster (2 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 41-90

PDB

Domain cluster: rep: LacPavin_0818_WC50_scaffold_3810_prodigal-single.1__X__X__00013__D8-52

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF26696.1 best	PTL_trimer	27.9	2.50e-06	98.0%	59.5%

D2 medium residues 91-210

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6y43A01	3.90.215.10	Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1	0.69	57.0	5.30e-01	99.2%	70.7%
3dclA02	2.40.10.170	Mainly Beta › Beta Barrel › Thrombin, subunit H ›	0.52	33.0	3.73e-01	80.8%	84.6%
3pieB05	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.52	26.0	3.36e-01	75.8%	87.5%
1bf5A04	3.30.505.10	Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain	0.52	35.0	3.64e-01	91.7%	74.3%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3917738	269.1.1.1 ↗	a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C	0.66	56.0	4.43e-01	100.0%	45.6%
3528647	922.1.1.30 ↗	few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › GON	0.61	45.0	3.95e-01	75.8%	99.4%
3419351	295.1.1.0 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain	0.61	27.0	3.57e-01	82.5%	75.4%
3537241	389.3.1.23 ↗	few secondary structure elements › EGF-like › LDL receptor-like module › LDL receptor-like module › GON	0.60	43.0	3.83e-01	75.0%	99.4%
5074282	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.56	27.0	3.83e-01	85.0%	100.0%
4024463	269.1.1.0 ↗	a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like	0.56	45.0	4.02e-01	85.0%	98.2%
3231484	269.1.1.0 ↗	a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like	0.51	46.0	3.97e-01	99.2%	98.9%

D3 medium residues 211-396

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vq8E02	3.90.930.12	Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6	0.51	25.0	3.29e-01	82.3%	87.1%
2jllA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.51	27.0	3.45e-01	98.4%	92.6%