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NC_023688.1__YP_009011704.1__CL89_gp203__00275
Bact-VirNC_023688.1__YP_009011704.1__CL89_gp203__00275
Identity
- Accession:
- NC_023688 ↗
- Kingdom:
- phage
Quality
73.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Angelvirus›
Aeromonas_phage_PX29
TaxID: 926067
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-80
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mhxB00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.62 | 48.0 | 4.65e-01 | 100.0% | 75.3% |
| 1ctfA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.54 | 42.0 | 4.32e-01 | 100.0% | 94.1% |
| 1crnA00 | 3.30.1350.10 | Alpha Beta › 2-Layer Sandwich › Crambin › Thionin-like | 0.54 | 31.0 | 3.79e-01 | 98.6% | 89.1% |
| 4g56A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.53 | 42.0 | 3.27e-01 | 88.9% | 95.9% |
| 7jrjK01 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.51 | 42.0 | 3.38e-01 | 95.8% | 78.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3173435 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.55 | 47.0 | 3.88e-01 | 100.0% | 97.1% |
| 3977318 | 2004.1.1.964 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Virul_Fac | 0.54 | 46.0 | 3.06e-01 | 100.0% | 30.6% |
D2
medium
residues 85-115