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NC_023688.1__YP_009011704.1__CL89_gp203__00275

Bact-Vir

NC_023688.1__YP_009011704.1__CL89_gp203__00275

Identity

Accession:
NC_023688 ↗
Kingdom:
phage

Quality

73.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-80
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mhxB00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 48.0 4.65e-01 100.0% 75.3%
1ctfA00 3.30.1390.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.54 42.0 4.32e-01 100.0% 94.1%
1crnA00 3.30.1350.10 Alpha Beta › 2-Layer Sandwich › Crambin › Thionin-like 0.54 31.0 3.79e-01 98.6% 89.1%
4g56A03 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.53 42.0 3.27e-01 88.9% 95.9%
7jrjK01 3.30.70.141 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain 0.51 42.0 3.38e-01 95.8% 78.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3173435 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.55 47.0 3.88e-01 100.0% 97.1%
3977318 2004.1.1.964 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Virul_Fac 0.54 46.0 3.06e-01 100.0% 30.6%
D2 medium residues 85-115
PDB