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NC_023691.1__YP_009012191.1__CL65_gp052__00052
Bact-VirNC_023691.1__YP_009012191.1__CL65_gp052__00052
Identity
- Accession:
- NC_023691 ↗
- Kingdom:
- phage
Quality
92.6
mean pLDDT
Taxonomy
TaxID: 1074308
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-77
Domain cluster:
rep: MW584153.1__QSM01801.1__PROPHIGD79-1_12__00012__D15-81
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gs3A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 48.0 | 3.70e-01 | 93.2% | 59.6% |
| 4bfrB02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 39.0 | 3.28e-01 | 75.3% | 85.9% |
| 3nftA00 | 1.20.1710.10 | Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like | 0.54 | 38.0 | 2.55e-01 | 71.2% | 89.3% |
| 7bv5D01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 45.0 | 3.56e-01 | 94.5% | 69.9% |
| 3wiwA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.54 | 44.0 | 2.85e-01 | 91.8% | 94.3% |
| 1g8mA03 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.53 | 47.0 | 3.76e-01 | 98.6% | 92.5% |
| 2wxfA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 39.0 | 3.34e-01 | 76.7% | 89.9% |
| 1go4A00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.53 | 42.0 | 3.11e-01 | 84.9% | 91.3% |
| 2gx5C00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 38.0 | 3.08e-01 | 80.8% | 65.2% |
| 3s99A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 41.0 | 3.05e-01 | 86.3% | 54.1% |
| 1dzuP00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.51 | 41.0 | 3.05e-01 | 91.8% | 77.5% |
| 4clcA00 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.51 | 40.0 | 3.14e-01 | 89.0% | 66.9% |
| 7bi2A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 35.0 | 3.16e-01 | 74.0% | 89.7% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927334 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.65 | 44.0 | 4.03e-01 | 93.2% | 53.1% |
| 5036180 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.64 | 43.0 | 3.92e-01 | 94.5% | 52.6% |
| 5023611 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.64 | 43.0 | 3.92e-01 | 94.5% | 53.2% |
| 5044154 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.64 | 43.0 | 3.98e-01 | 94.5% | 54.8% |
| 4990751 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.63 | 43.0 | 3.96e-01 | 93.2% | 54.7% |
| 5046988 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.63 | 42.0 | 3.84e-01 | 91.8% | 53.2% |
| 4406592 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.62 | 43.0 | 3.95e-01 | 97.3% | 55.3% |
| 4144066 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.62 | 40.0 | 3.76e-01 | 94.5% | 53.3% |
| 4453992 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.62 | 44.0 | 3.78e-01 | 93.2% | 47.8% |
| 4276062 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.62 | 41.0 | 3.85e-01 | 93.2% | 55.6% |
| 4933077 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.62 | 42.0 | 3.88e-01 | 94.5% | 54.7% |
| 4946249 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.61 | 42.0 | 3.83e-01 | 94.5% | 53.5% |
| 3258182 | 221.1.1.8 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd | 0.58 | 40.0 | 2.72e-01 | 72.6% | 28.9% |
| 3282232 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 40.0 | 3.30e-01 | 76.7% | 55.3% |
| 4979978 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 46.0 | 3.85e-01 | 89.0% | 75.2% |
| 3285288 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 41.0 | 3.37e-01 | 80.8% | 68.0% |
| 3471093 | 2485.1.1.2 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GSHPx | 0.56 | 46.0 | 4.05e-01 | 93.2% | 88.6% |
| 5001119 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 41.0 | 3.51e-01 | 76.7% | 73.0% |
| 5073550 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 41.0 | 3.54e-01 | 79.5% | 70.0% |
| 5072402 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.56 | 47.0 | 3.95e-01 | 93.2% | 76.8% |
| 2553578 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.55 | 35.0 | 4.11e-01 | 94.5% | 92.2% |
| 3339265 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.54 | 43.0 | 2.57e-01 | 90.4% | 18.5% |
| 3585365 | 221.1.1.168 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B | 0.54 | 38.0 | 2.60e-01 | 76.7% | 41.9% |
| 5024071 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 39.0 | 3.44e-01 | 79.5% | 67.0% |
| 4440297 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.53 | 47.0 | 3.83e-01 | 98.6% | 72.1% |
| 5048832 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 39.0 | 3.39e-01 | 93.2% | 49.2% |
| 4946558 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 37.0 | 3.26e-01 | 79.5% | 74.4% |
| 5050494 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.51 | 42.0 | 3.50e-01 | 91.8% | 73.1% |
| 3851015 | 221.1.1.8 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd | 0.51 | 38.0 | 2.89e-01 | 82.2% | 64.0% |
| 4096596 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 38.0 | 2.35e-01 | 82.2% | 22.6% |
| 4946840 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 37.0 | 3.24e-01 | 80.8% | 78.3% |