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NC_023699.1__YP_009013233.1__CL94_gp031__00031

Bact-Vir

NC_023699.1__YP_009013233.1__CL94_gp031__00031

Identity

Accession:
NC_023699 ↗
Kingdom:
phage

Quality

75.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-66
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p2aA01 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.60 40.0 4.44e-01 98.1% 100.0%
2qm0A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 45.0 2.99e-01 96.2% 45.6%
1ti2A01 2.20.25.340 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.52 40.0 3.77e-01 86.5% 93.9%
2x8fA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 41.0 2.59e-01 92.3% 26.5%
3rfrA03 2.60.40.1580 Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 0.52 41.0 3.18e-01 96.2% 66.9%
2ocgA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 40.0 2.73e-01 100.0% 46.1%
6jptA00 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.51 40.0 3.22e-01 96.2% 88.4%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.50 37.0 3.61e-01 86.5% 77.8%
2wg5F02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 35.0 3.43e-01 76.9% 98.3%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3681134 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 36.0 3.71e-01 88.5% 68.0%
4028456 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 43.0 4.49e-01 100.0% 100.0%
3559120 220.1.1.173 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK 0.52 43.0 3.38e-01 96.2% 88.3%
3604593 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 41.0 4.07e-01 94.2% 90.9%
4966853 375.1.1.324 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF1922 0.51 43.0 3.75e-01 96.2% 67.5%
3241908 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.50 38.0 3.21e-01 82.7% 61.1%
3924073 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 43.0 3.51e-01 100.0% 93.3%
4934222 375.1.1.12 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e 0.50 40.0 3.69e-01 92.3% 69.1%