NC_023703.1__YP_009013585.1__DORI_35__00035

Bact-Vir

Identity

78.8 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Mycobacterium_phage_Dori

TaxID: 1089121

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-111

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23781.2 best	Phage_TAC_16	82.7	2.60e-23	100.0%	88.5%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2crbA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.61	38.0	3.95e-01	70.5%	67.0%
1js8A01	1.10.1280.10	Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase	0.56	41.0	3.08e-01	78.1%	32.2%
4iluA02	1.20.58.1290	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain	0.55	38.0	3.79e-01	100.0%	68.5%
3kkbA00	1.20.120.880	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain	0.52	35.0	3.35e-01	73.3%	57.9%
7e4gA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.50	37.0	3.10e-01	79.0%	43.1%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3612403	7015.1.1.0 ↗	alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain	0.57	40.0	3.62e-01	73.3%	53.1%
3390061	5063.1.1.22 ↗	alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › LIN9_C	0.54	38.0	3.76e-01	98.1%	69.1%
4967911	7575.1.1.4 ↗	a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11	0.53	41.0	2.83e-01	84.8%	49.5%
3989031	4121.1.1.1 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA	0.50	36.0	2.71e-01	73.3%	69.6%
2739794	109.4.1.109 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1	0.50	38.0	2.76e-01	100.0%	27.1%

D2 medium residues 118-229

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23888.2 best	DUF7240	120.2	6.40e-35	92.0%	97.1%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3deeA01	1.10.150.690	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063	0.61	30.0	3.44e-01	100.0%	60.5%
4ioeA00	1.10.287.850	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain	0.56	27.0	3.08e-01	83.0%	58.6%
1e7uA05	1.10.1070.11	Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain	0.52	38.0	3.24e-01	77.7%	72.3%
1nv8B01	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.52	28.0	3.33e-01	100.0%	78.9%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4169890	5.1.11.6 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta_propel	0.55	40.0	2.61e-01	77.7%	28.5%
3266933	171.1.1.1 ↗	alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3	0.53	39.0	3.48e-01	77.7%	53.8%
3744787	633.22.1.0 ↗	alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR)	0.53	34.0	3.32e-01	100.0%	56.2%
3593718	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.52	31.0	3.13e-01	100.0%	55.7%