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NC_023735.1__YP_009017674.1__CL92_gp094__00060
Bact-VirNC_023735.1__YP_009017674.1__CL92_gp094__00060
Identity
- Accession:
- NC_023735 ↗
- Kingdom:
- phage
Quality
72.7
mean pLDDT
Taxonomy
TaxID: 691965
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-52
D2
medium
residues 74-138
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2q1fA02 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.57 | 49.0 | 3.06e-01 | 100.0% | 40.2% |
| 4pxcA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.54 | 44.0 | 2.79e-01 | 87.7% | 34.0% |
| 1pp0B00 | 3.40.198.10 | Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like | 0.53 | 43.0 | 3.10e-01 | 89.2% | 81.4% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 3.28e-01 | 93.8% | 42.6% |
| 1xp8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.52 | 33.0 | 3.45e-01 | 86.2% | 70.0% |
| 1yaxB00 | 3.30.450.140 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PhoQ sensor domain | 0.51 | 38.0 | 3.05e-01 | 89.2% | 39.6% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3441832 | 109.2.1.31 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_100 | 0.63 | 50.0 | 2.98e-01 | 87.7% | 30.4% |
| 4437758 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.62 | 45.0 | 3.59e-01 | 76.9% | 79.2% |
| 4436952 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.61 | 44.0 | 3.51e-01 | 76.9% | 74.6% |
| 5007787 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.60 | 41.0 | 2.81e-01 | 72.3% | 28.4% |
| 4665754 | 601.50.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar cap protein FliD helical bundle domain › Flagellar cap protein FliD helical bundle domain › FliD_C | 0.59 | 42.0 | 3.09e-01 | 76.9% | 52.0% |
| 4279209 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.58 | 43.0 | 3.46e-01 | 78.5% | 81.6% |
| 4107978 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.58 | 42.0 | 3.44e-01 | 78.5% | 80.8% |
| 4442677 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.57 | 41.0 | 3.41e-01 | 76.9% | 80.0% |
| 4076034 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.57 | 42.0 | 3.36e-01 | 78.5% | 78.5% |
| 3873199 | 109.4.1.1918 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N, Xpo1, PF26714 | 0.55 | 46.0 | 2.57e-01 | 100.0% | 26.0% |
| 3274977 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.55 | 46.0 | 3.36e-01 | 100.0% | 61.4% |
| 3505456 | 5067.1.1.16 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MgtC | 0.55 | 41.0 | 3.23e-01 | 80.0% | 97.1% |
| 3312804 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 47.0 | 3.35e-01 | 98.5% | 79.9% |
| 4143034 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 41.0 | 3.45e-01 | 86.2% | 80.8% |
| 4338232 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 41.0 | 3.39e-01 | 84.6% | 78.3% |
| 4035829 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.52 | 40.0 | 3.30e-01 | 86.2% | 76.9% |
| 4147512 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.52 | 39.0 | 3.33e-01 | 86.2% | 80.0% |
| 3689677 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.51 | 36.0 | 2.83e-01 | 75.4% | 68.1% |
| 5007248 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.50 | 38.0 | 2.61e-01 | 84.6% | 96.2% |