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NC_024137.1__YP_009031453.1__Bcp1_171__00172

Bact-Vir

NC_024137.1__YP_009031453.1__Bcp1_171__00172

Identity

Accession:
NC_024137 ↗
Kingdom:
phage

Quality

95.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-94
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vh6A01 6.10.140.1940 Special › Helix non-globular › Helix Hairpins › 0.80 61.0 5.65e-01 80.5% 63.9%
2dq0A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.70 51.0 4.60e-01 84.4% 55.1%
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.70 55.0 5.37e-01 100.0% 76.7%
4k7rA01 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.68 61.0 3.96e-01 100.0% 82.6%
7k7yG02 1.20.1120.10 Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" 0.65 44.0 2.80e-01 70.1% 55.2%
3fblA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 35.0 3.44e-01 74.0% 48.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3404270 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.65 47.0 3.95e-01 87.0% 44.6%
3308682 109.20.1.0 alpha superhelices › Repetitive alpha hairpins › Coatomer subunit alpha C-terminal domain › Coatomer subunit alpha C-terminal domain 0.53 47.0 3.01e-01 100.0% 27.5%