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NC_024143.1__YP_009032108.1__FH32_gp62__00062

Bact-Vir

NC_024143.1__YP_009032108.1__FH32_gp62__00062

Identity

Accession:
NC_024143 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 104-171
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF14279.13 best HNH_5 36.8 4.40e-09 79.4% 89.3%
PF13391.13 HNH_2 20.7 4.30e-04 70.6% 86.6%
PF01844.30 HNH 44.3 2.20e-11 69.1% 91.5%
D2 medium residues 11-51
PDB
Domain cluster: representative
CATH (88)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 65.0 5.90e-01 85.4% 77.8%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 5.59e-01 90.2% 70.1%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 61.0 6.27e-01 82.9% 94.9%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.79 70.0 4.71e-01 100.0% 44.0%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 59.0 5.98e-01 82.9% 97.6%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 4.94e-01 95.1% 53.8%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 6.02e-01 100.0% 74.6%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 61.0 5.57e-01 87.8% 73.2%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 61.0 5.32e-01 85.4% 65.6%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 5.21e-01 95.1% 59.8%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 55.0 4.75e-01 73.2% 58.3%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 69.0 5.44e-01 100.0% 64.7%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 70.0 6.04e-01 100.0% 85.2%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 5.32e-01 100.0% 66.7%
2ijlB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 4.89e-01 100.0% 49.5%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 5.62e-01 100.0% 77.5%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 5.50e-01 100.0% 73.1%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 5.89e-01 100.0% 88.9%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 4.79e-01 85.4% 50.0%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 59.0 5.66e-01 85.4% 95.7%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.54e-01 100.0% 91.3%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.09e-01 100.0% 62.5%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.03e-01 100.0% 61.1%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.47e-01 100.0% 77.5%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 68.0 6.03e-01 100.0% 94.8%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 5.90e-01 100.0% 81.0%
7u37A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.45e-01 95.1% 100.0%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 62.0 5.32e-01 97.6% 62.9%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 4.99e-01 95.1% 63.1%
2h6bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 67.0 5.04e-01 100.0% 65.6%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 56.0 5.50e-01 82.9% 82.2%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.09e-01 100.0% 65.2%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.34e-01 100.0% 79.5%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 4.89e-01 100.0% 69.4%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 67.0 5.46e-01 100.0% 76.7%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.08e-01 100.0% 62.5%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 5.37e-01 100.0% 87.3%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 5.57e-01 100.0% 87.3%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.17e-01 100.0% 63.0%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.74 57.0 3.93e-01 85.4% 28.4%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 4.41e-01 100.0% 42.0%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 4.41e-01 100.0% 38.6%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 57.0 5.44e-01 85.4% 79.2%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.58e-01 100.0% 85.7%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.74 60.0 4.53e-01 97.6% 45.9%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 4.95e-01 100.0% 60.7%
1mgtA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 5.20e-01 100.0% 87.7%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 57.0 4.54e-01 87.8% 50.6%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.06e-01 100.0% 67.1%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 4.99e-01 100.0% 69.0%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 5.02e-01 100.0% 54.0%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 5.85e-01 100.0% 91.1%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.30e-01 100.0% 78.3%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.10e-01 95.1% 73.5%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 64.0 4.76e-01 100.0% 49.0%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 63.0 4.00e-01 100.0% 22.8%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.43e-01 100.0% 82.8%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 65.0 5.91e-01 100.0% 83.6%
3e7lA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 60.0 5.38e-01 97.6% 75.0%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.12e-01 100.0% 74.0%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.06e-01 100.0% 58.7%
3iwfB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 4.90e-01 100.0% 52.8%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.23e-01 100.0% 69.4%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 4.32e-01 100.0% 38.5%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 4.78e-01 100.0% 69.0%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 4.84e-01 100.0% 57.3%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 5.32e-01 100.0% 72.9%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.33e-01 100.0% 84.1%
1eyvB00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.72 54.0 3.67e-01 80.5% 30.1%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.04e-01 100.0% 68.4%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.46e-01 100.0% 74.6%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 59.0 5.50e-01 100.0% 96.4%
6hxlB01 1.10.230.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 0.71 51.0 3.66e-01 80.5% 26.4%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.08e-01 100.0% 66.7%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 4.25e-01 100.0% 38.8%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.62e-01 100.0% 84.5%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.13e-01 100.0% 40.6%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.29e-01 100.0% 94.8%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 4.67e-01 100.0% 68.5%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.92e-01 100.0% 62.7%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.65e-01 100.0% 96.0%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 4.17e-01 100.0% 41.6%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 5.32e-01 97.6% 92.3%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.67 57.0 3.97e-01 100.0% 75.0%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.92e-01 100.0% 95.1%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 4.64e-01 100.0% 78.8%
2o3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 4.45e-01 100.0% 70.7%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 44.0 3.67e-01 85.4% 46.0%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4270741 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 72.0 7.27e-01 85.4% 97.5%
1769338 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 72.0 6.08e-01 100.0% 62.9%
4318089 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.82 73.0 6.41e-01 100.0% 73.3%
4971448 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.82 65.0 5.33e-01 87.8% 56.0%
4449179 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 73.0 6.41e-01 100.0% 73.3%
4610234 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.82 72.0 6.38e-01 100.0% 73.3%
3928067 101.1.1.356 alpha arrays › HTH › HTH › Three-helical HTH › HTH_11 0.82 66.0 6.03e-01 90.2% 72.7%
4040211 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.82 72.0 6.36e-01 100.0% 73.3%
3937075 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.82 66.0 6.01e-01 90.2% 72.7%
3838024 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.81 62.0 6.28e-01 85.4% 97.5%
4972037 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 67.0 6.28e-01 92.7% 90.0%
3931341 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 69.0 5.32e-01 97.6% 48.9%
3938920 101.1.1.397 alpha arrays › HTH › HTH › Three-helical HTH › PF30176 0.80 71.0 6.94e-01 100.0% 93.3%
5050961 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 67.0 6.79e-01 92.7% 100.0%
3970053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 67.0 6.29e-01 95.1% 100.0%
5011649 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 70.0 6.79e-01 97.6% 91.1%
5029686 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.79 64.0 5.25e-01 90.2% 57.3%
5014241 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.79 67.0 5.26e-01 95.1% 52.9%
4260985 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 66.0 5.29e-01 92.7% 61.3%
5045632 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.79 62.0 5.87e-01 87.8% 80.0%
5076135 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 65.0 5.87e-01 97.6% 80.0%
4963466 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.79 68.0 6.65e-01 97.6% 95.6%
5053441 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.78 64.0 5.70e-01 92.7% 70.0%
5042767 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 5.13e-01 100.0% 59.2%
4946254 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 65.0 6.37e-01 95.1% 93.3%
4295835 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 65.0 6.40e-01 97.6% 97.8%
3387117 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 67.0 5.45e-01 100.0% 68.8%
5078267 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.78 68.0 5.59e-01 100.0% 61.3%
5039245 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 60.0 5.70e-01 87.8% 82.0%
3946548 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 67.0 5.24e-01 100.0% 61.1%
4965520 101.1.1.556 alpha arrays › HTH › HTH › Three-helical HTH › DUF7317 0.77 65.0 5.97e-01 95.1% 83.6%
5030025 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 67.0 6.30e-01 97.6% 86.0%
3590569 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 68.0 5.44e-01 100.0% 68.8%
3967992 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 68.0 5.20e-01 100.0% 57.9%
5023662 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 66.0 5.36e-01 100.0% 71.2%
5015226 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 67.0 5.24e-01 100.0% 61.1%
5062514 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.77 64.0 6.32e-01 97.6% 97.8%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 67.0 5.95e-01 100.0% 78.3%
3966238 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 68.0 5.33e-01 100.0% 64.7%
5071071 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 64.0 5.41e-01 95.1% 62.9%
4970237 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.77 61.0 5.99e-01 90.2% 95.6%
3964284 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 5.70e-01 97.6% 75.0%
3603236 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 66.0 6.73e-01 95.1% 100.0%
5052578 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.77 59.0 6.00e-01 87.8% 100.0%
3978224 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 67.0 5.19e-01 100.0% 61.1%
3587054 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 67.0 5.27e-01 100.0% 64.7%
4654073 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.76 63.0 5.29e-01 97.6% 61.3%
4954184 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 65.0 5.13e-01 100.0% 62.2%
4945932 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 65.0 5.04e-01 100.0% 86.3%
3979933 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 66.0 5.07e-01 100.0% 57.9%
4953897 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 62.0 4.85e-01 100.0% 63.0%
4987329 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.75 65.0 5.17e-01 97.6% 54.1%
3947768 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.75 65.0 5.09e-01 100.0% 61.1%
3411416 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 60.0 5.88e-01 90.2% 93.2%
3324592 101.1.1.196 alpha arrays › HTH › HTH › Three-helical HTH › RWP-RK 0.75 58.0 5.93e-01 87.8% 100.0%
3469752 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.75 59.0 5.81e-01 90.2% 95.6%
5074132 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.75 63.0 4.63e-01 100.0% 52.5%
5045749 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.75 61.0 5.34e-01 95.1% 69.2%
4933930 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.74 64.0 5.21e-01 100.0% 56.2%
4994133 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.74 60.0 4.85e-01 95.1% 52.9%
5073467 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 67.0 6.50e-01 100.0% 97.8%
4624372 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 63.0 4.90e-01 100.0% 57.9%
4992556 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.74 64.0 4.78e-01 100.0% 44.8%
5028174 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.74 59.0 5.51e-01 95.1% 81.8%
3280235 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.74 66.0 5.36e-01 100.0% 62.7%
4380346 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 65.0 5.06e-01 100.0% 62.2%
4937291 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.74 60.0 5.89e-01 95.1% 97.8%
3943494 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 63.0 5.03e-01 100.0% 64.7%
4653037 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 63.0 4.59e-01 100.0% 50.8%
3277933 101.1.2.294 alpha arrays › HTH › HTH › winged helix domain › DUF742 0.74 63.0 5.51e-01 100.0% 69.2%
2674112 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 64.0 5.10e-01 100.0% 63.1%
4989022 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.73 61.0 5.97e-01 97.6% 100.0%
3808581 101.1.4.86 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › RWP-RK 0.73 60.0 5.28e-01 97.6% 70.8%
4211867 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.72 58.0 4.36e-01 95.1% 46.4%
3951084 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.72 64.0 5.33e-01 100.0% 67.1%
4350602 101.1.8.14 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.72 61.0 5.30e-01 97.6% 67.7%
4969333 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 52.0 5.14e-01 80.5% 75.6%
3974013 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.72 64.0 5.60e-01 100.0% 83.3%
3619451 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 62.0 5.38e-01 100.0% 76.9%
4968994 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 5.10e-01 95.1% 75.4%
3286659 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 62.0 5.23e-01 100.0% 75.7%
5026928 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 4.89e-01 100.0% 66.3%
3463281 101.1.1.196 alpha arrays › HTH › HTH › Three-helical HTH › RWP-RK 0.71 59.0 5.20e-01 100.0% 70.8%
4471924 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 5.55e-01 100.0% 92.7%
5049506 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 60.0 4.58e-01 100.0% 52.0%
3991300 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 61.0 4.95e-01 100.0% 60.0%
3985435 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 54.0 5.51e-01 92.7% 97.5%
5043775 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 4.11e-01 100.0% 44.3%
3312056 101.1.1.196 alpha arrays › HTH › HTH › Three-helical HTH › RWP-RK 0.70 60.0 5.85e-01 100.0% 95.6%
4010677 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 60.0 4.58e-01 100.0% 50.0%
3942695 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 61.0 5.25e-01 100.0% 78.5%
4151588 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 59.0 5.64e-01 100.0% 100.0%
3287303 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.68 55.0 4.27e-01 100.0% 51.4%
3284075 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.66 54.0 5.04e-01 100.0% 94.5%
D3 medium residues 55-94
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tmaJ00 3.30.50.10 Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A 0.77 65.0 5.72e-01 100.0% 64.9%
2vrwB03 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.58 50.0 4.62e-01 100.0% 75.5%
2ljxA00 3.30.240.40 Alpha Beta › 2-Layer Sandwich › CRO Repressor › E6 early regulatory protein 0.54 40.0 3.36e-01 90.0% 54.9%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4926891 377.1.1.126 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH 0.72 65.0 6.27e-01 100.0% 93.3%
3394481 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.71 63.0 6.32e-01 97.5% 97.5%
3431630 103.5.1.8 alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF1677 0.67 55.0 4.65e-01 100.0% 85.3%
3450949 4207.1.2.63 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › DUF1677 0.67 54.0 4.22e-01 100.0% 56.0%
3425436 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 49.0 4.94e-01 82.5% 92.5%
3451619 102.1.1.117 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF1677 0.66 53.0 4.22e-01 100.0% 60.0%
3939587 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.60 40.0 4.06e-01 70.0% 72.5%
3188913 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 38.0 3.56e-01 72.5% 54.0%
4015777 376.1.6.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain 0.57 45.0 4.14e-01 92.5% 80.0%
3198599 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 40.0 3.92e-01 92.5% 72.1%
3394580 386.1.1.274 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_14 0.54 37.0 3.86e-01 92.5% 100.0%
3898158 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 41.0 3.61e-01 97.5% 57.1%
3776807 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.52 35.0 3.57e-01 92.5% 72.5%
3900575 386.1.1.69 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › AKAP95 0.52 42.0 3.94e-01 100.0% 72.7%
3392575 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.52 37.0 3.84e-01 95.0% 91.4%
3517826 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.52 38.0 3.88e-01 97.5% 97.1%
3517096 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 37.0 3.66e-01 100.0% 80.0%
3778858 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 36.0 3.44e-01 100.0% 60.0%
3227505 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 36.0 3.50e-01 100.0% 68.0%
3509877 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.50 35.0 3.57e-01 100.0% 80.0%
3995179 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.50 36.0 3.56e-01 100.0% 71.1%
3269874 376.1.1.95 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RH_dom 0.50 41.0 3.72e-01 100.0% 70.0%
3703629 386.1.1.18 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz 0.50 36.0 3.61e-01 100.0% 80.0%