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NC_024206.1__YP_009035516.1__X__00049

Bact-Vir

NC_024206.1__YP_009035516.1__X__00049

Identity

Accession:
NC_024206 ↗
Kingdom:
phage

Quality

83.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactobacillus_phage_phi_jlb1

TaxID: 1416334

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-77
PDB
Domain cluster: rep: HE956704.1__CCI88344.1__BN107_000030__00027__D25-98
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o07A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 42.0 3.14e-01 80.3% 87.0%
3o4fH02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 41.0 3.02e-01 80.3% 86.2%
4dvjB01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.52 38.0 2.94e-01 81.6% 98.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3923173 384.1.1.1 ↗ few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI 0.56 35.0 3.78e-01 85.5% 73.8%
3217805 386.1.1.366 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › BPTI_nem 0.53 36.0 3.63e-01 85.5% 68.8%
3930569 384.1.1.8 ↗ few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › BPTI_nem 0.52 43.0 4.15e-01 94.7% 85.6%
3573641 384.1.1.8 ↗ few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › BPTI_nem 0.50 43.0 4.31e-01 97.4% 97.4%