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NC_024215.1__YP_009036901.1__GJ21_gp76__00076

Bact-Vir

NC_024215.1__YP_009036901.1__GJ21_gp76__00076

Identity

Accession:
NC_024215 ↗
Kingdom:
phage

Quality

84.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nevevirus› Lactococcus_phage_P078

TaxID: 1476886

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 278-359
PDB
Domain cluster: rep: OV696619.1__CAH1192782.1__MONT_32__00032__D16-111
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF09374.16 best PG_binding_3 27.8 3.30e-06 70.7% 40.8%
PF01471.24 PG_binding_1 25.8 1.40e-05 57.3% 82.5%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4g54A02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.65 49.0 5.24e-01 91.5% 91.7%
3cl3A01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.58 37.0 3.71e-01 100.0% 63.1%
6nmgA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 38.0 2.43e-01 76.8% 24.4%
1tujA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.51 40.0 3.55e-01 86.6% 95.1%
2nr7A00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.50 46.0 3.45e-01 100.0% 69.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3933825 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.62 46.0 4.80e-01 97.6% 85.3%
4028661 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.53 33.0 3.07e-01 100.0% 47.3%
4380775 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.50 42.0 3.23e-01 93.9% 45.0%
D2 medium residues 4-166
PDB
Domain cluster: rep: NC_041875.1__YP_009594310.1__FDG92_gp21__00021__D5-180
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01510.31 best Amidase_2 40.5 4.60e-10 78.5% 94.6%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ivvA00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.87 84.0 8.18e-01 100.0% 97.1%
3latA00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.86 83.0 7.55e-01 100.0% 81.6%
1yb0B00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.85 78.0 7.95e-01 100.0% 97.5%
3rdrA00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.84 75.0 7.81e-01 100.0% 99.3%
4olsA00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.80 77.0 7.32e-01 100.0% 97.3%
1aroL00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.77 64.0 6.71e-01 93.9% 94.6%
6su5A01 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.76 67.0 6.97e-01 98.2% 98.7%
2eaxA00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.73 68.0 6.82e-01 98.8% 97.6%
3ep1A00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.70 66.0 6.58e-01 100.0% 98.8%
2g6zA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.70 36.0 3.85e-01 90.2% 54.4%
4d3pA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.68 35.0 3.71e-01 90.2% 54.4%
3lyuA01 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.65 36.0 4.24e-01 90.2% 76.8%
2p4dA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.64 34.0 3.45e-01 91.4% 50.3%
4jmjA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 37.0 3.61e-01 91.4% 53.0%
1t6cA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 38.0 4.28e-01 90.8% 81.6%
2zm5B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 36.0 3.20e-01 91.4% 41.3%
3crmA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 35.0 3.68e-01 91.4% 61.2%
4zwnB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 43.0 3.44e-01 100.0% 39.2%
3fjyA02 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.58 33.0 3.24e-01 90.2% 50.6%
3d3qA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 35.0 3.67e-01 91.4% 64.3%
3cerC01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 37.0 4.10e-01 90.8% 81.2%
3a8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 36.0 3.51e-01 91.4% 57.3%
3vsjA00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.55 46.0 3.90e-01 90.2% 77.0%
4wxmB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 34.0 3.70e-01 90.2% 76.0%
1bxbA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 46.0 3.48e-01 96.3% 38.5%
4iqyB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.53 47.0 4.25e-01 95.1% 85.8%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 44.0 3.66e-01 91.4% 50.4%
3igzB01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.53 44.0 3.55e-01 87.7% 83.3%
2gdzA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 45.0 3.86e-01 92.6% 62.4%
5awhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 37.0 3.65e-01 90.2% 65.9%
7aj0A01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.52 44.0 3.35e-01 90.2% 81.0%
1bifA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 35.0 3.28e-01 88.3% 53.9%
1aukA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.52 43.0 3.28e-01 89.6% 79.7%
6uutB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 39.0 3.69e-01 80.4% 94.4%
3zmrB02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 42.0 3.24e-01 89.6% 47.7%
1ga6A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.50 41.0 3.15e-01 89.6% 38.2%
6lfzA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 35.0 3.05e-01 86.5% 46.9%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587007 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.87 84.0 8.13e-01 100.0% 93.8%
1914461 285.1.1.0 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like 0.87 84.0 8.17e-01 100.0% 97.1%
1904118 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.87 84.0 8.21e-01 100.0% 98.3%
1902112 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.86 83.0 7.55e-01 100.0% 81.6%
1902111 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.84 78.0 7.76e-01 100.0% 93.9%
4837356 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.84 67.0 6.92e-01 82.8% 93.6%
4140249 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.83 76.0 7.63e-01 100.0% 93.3%
4031908 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.82 78.0 7.39e-01 100.0% 93.7%
2845647 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.81 69.0 7.19e-01 100.0% 95.4%
2774594 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.81 69.0 7.21e-01 100.0% 96.1%
4650125 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.80 77.0 7.52e-01 100.0% 96.6%
3278570 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.79 75.0 7.28e-01 100.0% 95.0%
1900462 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.77 64.0 6.71e-01 93.9% 94.6%
2445367 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.77 64.0 6.58e-01 95.1% 91.0%
3897241 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.75 69.0 7.05e-01 98.8% 100.0%
4265814 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.75 70.0 7.04e-01 98.8% 100.0%
3416111 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.75 69.0 6.84e-01 98.2% 95.3%
3910569 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.74 69.0 6.59e-01 98.8% 89.7%
3389811 285.1.1.1 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › Amidase_2 0.74 68.0 6.68e-01 98.2% 92.6%
4034532 285.1.1.0 ↗ a+b three layers › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like › N-acetylmuramoyl-L-alanine amidase-like 0.74 68.0 6.92e-01 100.0% 98.8%
3700447 2007.2.3.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc 0.69 37.0 3.68e-01 90.2% 49.4%
4440706 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.67 39.0 4.29e-01 90.2% 69.6%
3945798 7550.1.1.1 ↗ a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.64 37.0 4.19e-01 90.2% 73.6%
4955397 2007.2.3.11 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTP-SAK 0.59 35.0 3.76e-01 90.2% 64.8%
5025537 7550.1.1.1 ↗ a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.58 37.0 4.08e-01 90.2% 79.2%
None — 0.54 44.0 4.01e-01 87.1% 68.6%
3609227 2007.2.3.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc 0.54 37.0 3.50e-01 90.8% 56.0%
3689453 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 39.0 3.90e-01 90.8% 73.5%
3602542 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.53 40.0 3.34e-01 96.9% 45.4%
4288116 7515.1.1.2 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.52 44.0 3.13e-01 89.6% 62.7%
3898215 7515.1.1.4 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,Sulfatase_C 0.52 43.0 3.10e-01 87.7% 62.9%
3667961 2007.5.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL 0.52 44.0 3.63e-01 90.2% 84.6%
3386776 7515.1.1.6 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest 0.51 42.0 3.58e-01 87.7% 85.7%
3568926 7515.1.1.6 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest 0.51 42.0 3.12e-01 87.1% 57.0%
4880281 2002.1.1.8 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase 0.51 42.0 3.26e-01 100.0% 39.7%
D3 medium residues 187-261
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08239.18 best SH3_3 29.3 1.10e-06 82.7% 98.2%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8b2gA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.96 73.0 8.24e-01 85.3% 100.0%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.86 68.0 7.23e-01 96.0% 93.9%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.85 64.0 7.13e-01 90.7% 98.3%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 62.0 7.01e-01 89.3% 100.0%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 69.0 7.36e-01 93.3% 98.5%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 65.0 6.74e-01 94.7% 88.6%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.79 71.0 7.28e-01 100.0% 100.0%
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 73.0 6.54e-01 100.0% 82.8%
2mk5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 70.0 5.71e-01 100.0% 65.6%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 54.0 5.80e-01 94.7% 87.5%
4epcA01 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 6.27e-01 100.0% 87.7%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.73 67.0 6.38e-01 100.0% 87.2%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 55.0 5.80e-01 93.3% 88.2%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 54.0 5.86e-01 97.3% 93.7%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 56.0 5.92e-01 97.3% 93.9%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.68e-01 96.0% 89.2%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 51.0 5.44e-01 94.7% 88.1%
2dlpA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 50.0 4.85e-01 96.0% 68.2%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 54.0 5.46e-01 96.0% 85.3%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 52.0 5.21e-01 94.7% 82.1%
2db9A01 3.90.70.200 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain 0.62 50.0 4.12e-01 98.7% 49.6%
3anwA02 3.40.5.50 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.62 41.0 4.60e-01 100.0% 89.7%
1ft9A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 43.0 3.59e-01 100.0% 42.0%
2fmyA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 44.0 3.60e-01 100.0% 41.9%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 54.0 5.18e-01 100.0% 89.3%
2fqpA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 42.0 3.90e-01 100.0% 61.1%
1dj7B00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.85e-01 100.0% 95.9%
5d1iA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 44.0 3.79e-01 100.0% 53.0%
1omiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 45.0 4.05e-01 100.0% 61.9%
5j3uA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 43.0 3.62e-01 100.0% 49.2%
3gydA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 43.0 3.29e-01 100.0% 35.4%
7rh9A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 45.0 3.53e-01 100.0% 42.3%
2lsmA00 3.40.5.70 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › DNA packaging chaperone protein FI, C-terminal beta-strand domain 0.55 39.0 4.25e-01 100.0% 91.8%
2h6cA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 40.0 3.43e-01 100.0% 46.5%
3shrA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 42.0 3.47e-01 100.0% 46.7%
3pnrA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 46.0 3.33e-01 100.0% 87.9%
1o7fA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 42.0 3.35e-01 100.0% 41.3%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 36.0 3.54e-01 100.0% 62.8%
3dn7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 41.0 3.32e-01 100.0% 43.4%
7pzaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 40.0 3.50e-01 100.0% 51.6%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 39.0 4.10e-01 98.7% 94.0%
1wapA00 2.60.40.50 Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like 0.51 36.0 3.80e-01 97.3% 83.8%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4013287 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.97 75.0 8.40e-01 86.7% 100.0%
3289848 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.90 79.0 7.91e-01 92.0% 97.3%
4602101 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.89 71.0 7.65e-01 96.0% 95.4%
3840076 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.89 69.0 7.70e-01 92.0% 100.0%
4520767 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.88 68.0 7.10e-01 92.0% 85.7%
4550532 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.88 73.0 6.74e-01 96.0% 71.1%
4588126 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 75.0 7.00e-01 89.3% 86.5%
4537356 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.88 67.0 7.48e-01 89.3% 98.3%
4196229 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.88 70.0 7.25e-01 94.7% 88.6%
3204891 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 78.0 7.87e-01 93.3% 97.3%
4038705 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.87 69.0 7.43e-01 93.3% 95.4%
4303967 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 78.0 7.23e-01 94.7% 90.0%
4127826 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.86 71.0 7.66e-01 97.3% 100.0%
4386715 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.85 79.0 7.55e-01 98.7% 95.3%
137916 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.85 65.0 7.01e-01 92.0% 92.3%
2410170 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.85 66.0 7.18e-01 94.7% 96.8%
4427420 4.1.1.436 ↗ beta barrels › SH3 › SH3 › SH3 › PF29249 0.85 71.0 6.96e-01 96.0% 82.5%
4207556 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.85 73.0 7.59e-01 94.7% 97.1%
4031670 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.84 64.0 7.10e-01 90.7% 98.3%
137947 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.83 67.0 7.05e-01 94.7% 94.0%
4358722 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.83 66.0 5.82e-01 96.0% 60.0%
3587555 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 64.0 6.67e-01 94.7% 87.1%
1263586 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 65.0 6.66e-01 94.7% 86.1%
1263580 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.83 65.0 6.54e-01 94.7% 82.7%
4091533 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.82 69.0 7.16e-01 97.3% 95.7%
1290375 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.82 69.0 7.30e-01 94.7% 98.5%
1673571 4.1.1.120 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_16 0.81 71.0 7.12e-01 100.0% 90.8%
4650162 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 65.0 6.88e-01 98.7% 98.5%
3700744 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 73.0 6.53e-01 96.0% 97.0%
3988893 4.1.1.59 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_5 0.80 67.0 6.80e-01 96.0% 89.3%
3700747 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 75.0 6.97e-01 100.0% 94.4%
3700872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 74.0 7.12e-01 100.0% 90.6%
4032300 4.1.1.59 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_5 0.79 74.0 6.94e-01 100.0% 91.1%
4009391 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 68.0 6.64e-01 96.0% 85.0%
4033073 4.1.1.86 ↗ beta barrels › SH3 › SH3 › SH3 › GW 0.79 70.0 7.09e-01 100.0% 94.7%
1905739 4.1.1.59 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_5 0.79 74.0 7.00e-01 100.0% 95.3%
3579483 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.79 69.0 6.61e-01 93.3% 100.0%
4261760 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.79 71.0 6.47e-01 96.0% 76.8%
4041535 4.1.1.59 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_5 0.78 73.0 6.91e-01 100.0% 93.2%
3385856 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.78 61.0 6.61e-01 96.0% 98.4%
3969959 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 71.0 6.59e-01 100.0% 81.1%
3978088 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 60.0 6.47e-01 97.3% 95.4%
4091791 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 65.0 6.52e-01 96.0% 89.3%
4291404 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 63.0 6.31e-01 94.7% 88.0%
1293364 4.1.1.59 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_5 0.76 70.0 5.71e-01 100.0% 65.6%
3715828 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.76 67.0 6.59e-01 96.0% 92.5%
4063512 4.1.1.86 ↗ beta barrels › SH3 › SH3 › SH3 › GW 0.74 66.0 6.66e-01 100.0% 96.0%
3707023 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 66.0 5.91e-01 96.0% 78.0%
4340107 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 65.0 6.53e-01 94.7% 96.0%
3909202 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 57.0 5.87e-01 100.0% 88.6%
3718657 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 56.0 6.12e-01 92.0% 98.4%
1545880 4.1.1.278 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.72 55.0 5.44e-01 94.7% 76.2%
3594081 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 61.0 6.03e-01 96.0% 93.8%
3763060 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 56.0 5.82e-01 97.3% 92.9%
4138935 4.1.1.241 ↗ beta barrels › SH3 › SH3 › SH3 › NifZ 0.66 56.0 5.64e-01 97.3% 92.0%
3586662 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 61.0 5.11e-01 100.0% 85.8%
3576443 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 54.0 5.55e-01 96.0% 94.3%
2325643 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.64 45.0 3.70e-01 100.0% 40.7%
3254941 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.63 51.0 4.26e-01 98.7% 50.8%
315942 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.63 44.0 3.53e-01 100.0% 37.2%
3939175 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.63 51.0 4.03e-01 98.7% 44.0%
3498558 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.62 50.0 4.01e-01 98.7% 44.0%
3502355 4076.3.1.3 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › SLD5_C 0.62 43.0 4.91e-01 97.3% 100.0%
3738161 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.61 49.0 4.17e-01 98.7% 52.8%
3837281 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.61 49.0 3.80e-01 98.7% 39.4%
3447437 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.60 50.0 4.16e-01 98.7% 51.1%
3498585 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 54.0 4.62e-01 100.0% 96.7%
3395901 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.60 48.0 4.01e-01 98.7% 50.8%
3630404 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.59 44.0 3.51e-01 100.0% 39.3%
3329012 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.59 47.0 3.77e-01 98.7% 43.2%
3669161 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.56 49.0 3.93e-01 98.7% 47.7%
3599574 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.54 41.0 3.23e-01 100.0% 38.7%
3226173 3114.1.1.4 ↗ beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › PF30893 0.51 42.0 4.28e-01 94.7% 96.0%