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NC_024216.1__YP_009036911.1__FP74_gp008__00008

Bact-Vir

NC_024216.1__YP_009036911.1__FP74_gp008__00008

Identity

Accession:
NC_024216 ↗
Kingdom:
phage

Quality

66.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bastillevirus› Bacillus_phage_CAM003

TaxID: 1486657

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-96
PDB
D2 high residues 119-208
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 40.0 5.02e-01 82.2% 90.4%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 42.0 4.36e-01 82.2% 69.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 36.0 4.29e-01 81.1% 81.4%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.64 48.0 3.77e-01 82.2% 97.6%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.63 42.0 4.07e-01 77.8% 61.0%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 39.0 4.26e-01 84.4% 76.3%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 38.0 4.36e-01 81.1% 87.5%
3lkmA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 48.0 4.00e-01 85.6% 93.6%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 37.0 4.37e-01 82.2% 94.9%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.59 45.0 4.00e-01 81.1% 100.0%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.59 40.0 3.03e-01 82.2% 29.1%
3rwxA02 2.40.128.350 Mainly Beta › Beta Barrel › Lipocalin › 0.59 44.0 3.92e-01 80.0% 93.2%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.59 36.0 3.98e-01 82.2% 80.6%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.58 44.0 3.51e-01 81.1% 75.6%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 39.0 2.96e-01 84.4% 30.9%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 4.16e-01 84.4% 81.5%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.95e-01 84.4% 79.7%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.54 42.0 3.99e-01 84.4% 94.5%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.54 42.0 4.00e-01 84.4% 95.3%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 40.0 3.55e-01 81.1% 89.1%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.53 42.0 3.26e-01 83.3% 86.7%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.53 39.0 3.72e-01 80.0% 96.4%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.53 37.0 3.52e-01 97.8% 59.8%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.53 40.0 3.57e-01 83.3% 86.3%
4boeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 3.87e-01 98.9% 85.1%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 37.0 3.12e-01 72.2% 73.5%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.53 40.0 3.81e-01 84.4% 79.6%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 38.0 3.33e-01 76.7% 80.3%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 35.0 3.74e-01 83.3% 84.7%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.87e-01 85.6% 77.5%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.52 33.0 3.47e-01 82.2% 74.0%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.52 42.0 3.48e-01 92.2% 96.6%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.51 41.0 3.44e-01 88.9% 73.5%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.51 40.0 3.79e-01 83.3% 82.6%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.85e-01 88.9% 82.4%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.70e-01 94.4% 88.0%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 43.0 3.72e-01 98.9% 86.6%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 35.0 3.60e-01 71.1% 85.7%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.50 45.0 3.32e-01 100.0% 93.3%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.50 42.0 3.43e-01 94.4% 80.2%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 40.0 5.04e-01 81.1% 89.1%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 42.0 4.30e-01 88.9% 64.7%
3595169 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 45.0 4.98e-01 82.2% 88.6%
5039793 219.1.1.77 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 0.66 44.0 3.33e-01 91.1% 29.8%
4680746 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.65 39.0 4.32e-01 80.0% 73.3%
165654 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.65 41.0 4.47e-01 82.2% 77.0%
4654204 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.65 47.0 4.80e-01 94.4% 77.5%
4426276 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 41.0 4.58e-01 78.9% 84.3%
2978978 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 43.0 4.65e-01 83.3% 84.0%
4937587 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.63 41.0 3.32e-01 85.6% 35.8%
3600139 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.17e-01 82.2% 60.9%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 42.0 4.53e-01 82.2% 82.7%
3710131 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.62 49.0 4.23e-01 85.6% 67.4%
3519897 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 48.0 4.32e-01 84.4% 72.3%
4457262 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.61 40.0 3.78e-01 85.6% 54.5%
4016602 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.61 48.0 4.04e-01 82.2% 77.6%
4283343 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 41.0 4.36e-01 82.2% 78.8%
3514556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 38.0 4.28e-01 86.7% 81.4%
3741657 220.1.1.11 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.61 47.0 4.34e-01 83.3% 78.3%
5043132 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.60 39.0 4.02e-01 82.2% 69.4%
3268160 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 44.0 4.46e-01 82.2% 77.8%
4624358 6.1.1.2 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Kunitz_legume 0.60 45.0 3.80e-01 83.3% 92.1%
3264986 220.1.1.11 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.59 46.0 4.33e-01 84.4% 81.8%
3269834 220.1.1.95 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH 0.59 46.0 4.15e-01 84.4% 68.8%
3480327 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.59 45.0 4.14e-01 84.4% 82.4%
3690989 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 46.0 3.71e-01 84.4% 68.9%
3213122 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.59 35.0 3.33e-01 81.1% 49.5%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 44.0 4.39e-01 83.3% 77.9%
3499649 220.4.1.0 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins 0.57 42.0 4.29e-01 81.1% 80.0%
4026653 220.1.1.11 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.57 44.0 4.15e-01 84.4% 80.9%
None — 0.57 43.0 3.48e-01 81.1% 77.8%
4251101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 38.0 3.89e-01 82.2% 71.8%
3618840 9.1.1.48 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_10 0.57 49.0 3.79e-01 97.8% 60.0%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 44.0 4.65e-01 83.3% 92.5%
4387099 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 39.0 4.10e-01 82.2% 80.0%
4433014 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.56 43.0 3.41e-01 82.2% 74.7%
3436557 220.4.1.8 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins › ZGRF1-like_N 0.56 42.0 4.53e-01 82.2% 98.7%
3315951 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.55 42.0 4.38e-01 82.2% 92.4%
3719783 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 42.0 4.15e-01 82.2% 77.7%
4123780 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.55 41.0 3.30e-01 81.1% 75.6%
3965943 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.55 41.0 3.30e-01 81.1% 74.1%
3933857 9.1.1.48 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_10 0.55 46.0 3.64e-01 97.8% 60.0%
3241614 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 47.0 4.08e-01 97.8% 86.2%
3280720 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.54 41.0 3.42e-01 83.3% 92.6%
3448643 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.54 45.0 3.41e-01 88.9% 53.7%
4545520 4.7.1.7 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.54 36.0 3.73e-01 82.2% 72.9%
4247805 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.54 38.0 2.95e-01 73.3% 92.9%
3313139 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.54 48.0 3.88e-01 100.0% 90.9%
852 9.1.1.29 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BFA1_C 0.54 40.0 3.55e-01 81.1% 89.1%
3947173 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.53 46.0 3.68e-01 96.7% 97.8%
4498349 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.53 39.0 3.26e-01 81.1% 79.4%
5080210 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.53 47.0 3.58e-01 100.0% 94.1%
4281661 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.51 42.0 3.46e-01 91.1% 98.2%
3718664 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.51 42.0 3.25e-01 91.1% 92.8%
4398865 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.50 38.0 3.75e-01 80.0% 84.2%
3236876 1.1.5.49 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.50 40.0 2.89e-01 88.9% 77.3%
3808680 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.50 35.0 2.57e-01 75.6% 75.1%
3504086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 38.0 3.85e-01 81.1% 86.7%
3269812 220.1.1.83 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_N 0.50 43.0 3.54e-01 97.8% 97.1%