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NC_024369.2__YP_009043873.1__SBVcX29_0002__00066

Bact-Vir

NC_024369.2__YP_009043873.1__SBVcX29_0002__00066

Identity

Accession:
NC_024369 ↗
Kingdom:
phage

Quality

63.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_X29

TaxID: 1500713

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 103-133
PDB
Domain cluster: representative
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3239215 375.10.1.1 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol 0.76 62.0 4.34e-01 96.8% 35.2%
3744731 376.1.1.11 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › COPI_C 0.73 61.0 5.17e-01 100.0% 56.4%
4968925 375.1.1.356 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29210 0.64 47.0 4.63e-01 96.8% 92.5%
5058387 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.53 38.0 3.19e-01 90.3% 72.9%