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NC_024375.1__YP_009044107.1__LP026_022__00022

Bact-Vir

NC_024375.1__YP_009044107.1__LP026_022__00022

Identity

Accession:
NC_024375 ↗
Kingdom:
phage

Quality

62.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Homburgvirus› Listeria_phage_LP-026

TaxID: 1173745

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 59-114
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04297.21 best UPF0122 23.0 1.10e-04 96.4% 45.5%
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.94 75.0 5.34e-01 83.9% 33.8%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 71.0 7.53e-01 82.1% 91.8%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 74.0 6.97e-01 85.7% 76.9%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 72.0 6.87e-01 83.9% 75.0%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 69.0 6.72e-01 80.4% 73.8%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 72.0 6.89e-01 85.7% 77.8%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.89 64.0 4.77e-01 76.8% 33.3%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 67.0 6.60e-01 82.1% 75.0%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.87 68.0 4.98e-01 85.7% 33.3%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 59.0 6.51e-01 75.0% 88.9%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 69.0 7.03e-01 92.9% 88.9%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 70.0 6.14e-01 89.3% 66.3%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 72.0 5.73e-01 92.9% 53.3%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.83 66.0 5.50e-01 85.7% 52.1%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.83 74.0 4.78e-01 100.0% 25.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 66.0 6.60e-01 94.6% 83.9%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 68.0 6.79e-01 96.4% 84.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 58.0 5.86e-01 73.2% 85.5%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 72.0 6.25e-01 100.0% 65.0%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 7.05e-01 100.0% 89.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 70.0 6.36e-01 100.0% 72.2%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 7.00e-01 98.2% 91.1%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.81 63.0 4.05e-01 85.7% 18.8%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 6.31e-01 100.0% 77.8%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 66.0 6.74e-01 100.0% 90.9%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 71.0 6.07e-01 98.2% 77.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 6.69e-01 100.0% 92.6%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 5.87e-01 96.4% 65.8%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 4.95e-01 82.1% 69.2%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 6.50e-01 87.5% 94.0%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 73.0 6.48e-01 100.0% 73.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 5.70e-01 94.6% 59.8%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 55.0 6.01e-01 75.0% 95.5%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 6.37e-01 94.6% 79.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 6.46e-01 96.4% 98.0%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.77 55.0 4.62e-01 82.1% 44.3%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.77 61.0 5.12e-01 87.5% 54.3%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 6.40e-01 94.6% 84.1%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 53.0 5.96e-01 75.0% 100.0%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 5.47e-01 94.6% 70.1%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 50.0 5.01e-01 82.1% 67.2%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 4.67e-01 92.9% 48.2%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.25e-01 83.9% 89.3%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.74 64.0 4.78e-01 94.6% 43.5%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 5.43e-01 94.6% 67.4%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 6.12e-01 94.6% 98.4%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 6.06e-01 94.6% 96.8%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.73e-01 94.6% 87.5%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 6.07e-01 96.4% 96.8%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.40e-01 92.9% 82.9%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.70e-01 94.6% 89.9%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 4.98e-01 94.6% 64.3%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.69e-01 89.3% 66.0%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.38e-01 91.1% 90.1%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.16e-01 96.4% 69.3%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.70e-01 100.0% 80.3%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.03e-01 87.5% 78.2%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 5.40e-01 96.4% 94.4%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 58.0 4.75e-01 96.4% 94.2%
3by6C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 5.01e-01 92.9% 83.1%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 47.0 4.48e-01 75.0% 68.8%
2pjpA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 5.40e-01 94.6% 93.4%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 4.20e-01 96.4% 47.2%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 56.0 5.09e-01 100.0% 77.3%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.70e-01 94.6% 82.5%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 47.0 3.79e-01 82.1% 66.0%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 46.0 3.99e-01 83.9% 84.4%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 47.0 4.16e-01 87.5% 90.2%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 46.0 4.03e-01 91.1% 91.2%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.54 43.0 3.96e-01 87.5% 82.2%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 46.0 4.02e-01 96.4% 96.5%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3972638 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 77.0 7.30e-01 85.7% 73.8%
3971149 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 77.0 6.69e-01 85.7% 60.0%
3967675 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.94 72.0 7.62e-01 80.4% 90.0%
3971860 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 72.0 7.64e-01 80.4% 90.0%
3954433 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.94 65.0 7.20e-01 75.0% 88.9%
3967026 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 75.0 6.67e-01 83.9% 62.7%
4876274 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.93 71.0 6.88e-01 80.4% 72.6%
4037682 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.93 76.0 6.08e-01 85.7% 53.0%
3972713 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 76.0 6.19e-01 85.7% 51.6%
5028064 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.93 71.0 5.23e-01 87.5% 34.6%
3971395 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 75.0 6.69e-01 85.7% 64.0%
3969641 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.92 74.0 6.40e-01 83.9% 60.0%
4024517 101.1.1.64 ↗ alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.92 73.0 5.62e-01 83.9% 40.9%
4944726 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 73.0 7.17e-01 83.9% 80.0%
4944862 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 75.0 6.51e-01 85.7% 60.0%
4497189 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.92 73.0 6.93e-01 83.9% 72.3%
3967748 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 75.0 6.36e-01 85.7% 56.5%
4534822 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.92 73.0 6.51e-01 83.9% 64.0%
3953011 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 63.0 6.43e-01 75.0% 72.7%
4243530 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 73.0 6.90e-01 83.9% 72.3%
2464007 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 73.0 6.84e-01 83.9% 72.7%
4947436 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 73.0 7.35e-01 83.9% 87.3%
4663875 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.92 73.0 4.61e-01 83.9% 20.0%
2330636 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 71.0 7.34e-01 82.1% 88.7%
4233279 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.91 72.0 4.59e-01 83.9% 20.0%
3973360 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 72.0 6.64e-01 83.9% 68.6%
3288971 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.91 72.0 5.11e-01 83.9% 32.0%
5064701 101.1.2.879 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF134 0.91 74.0 6.42e-01 85.7% 61.3%
4945127 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.91 73.0 6.26e-01 85.7% 58.8%
4372550 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 74.0 6.14e-01 85.7% 53.3%
4470607 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.91 73.0 5.63e-01 85.7% 46.1%
4997411 101.1.3.33 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.91 73.0 6.39e-01 85.7% 60.0%
3951829 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.91 73.0 6.24e-01 85.7% 61.2%
4334910 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.91 71.0 5.36e-01 83.9% 38.4%
3587538 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 73.0 6.80e-01 85.7% 70.6%
4244028 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.91 71.0 6.98e-01 83.9% 80.0%
3640035 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.91 63.0 5.41e-01 78.6% 48.2%
3284461 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 71.0 4.50e-01 83.9% 19.2%
2817645 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.90 71.0 6.22e-01 83.9% 58.7%
4237551 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 72.0 5.94e-01 85.7% 52.6%
4304581 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.90 72.0 5.97e-01 85.7% 56.4%
4202221 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.90 73.0 6.76e-01 85.7% 70.6%
4270967 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.90 72.0 5.64e-01 85.7% 44.5%
3284469 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 72.0 6.46e-01 85.7% 64.0%
4393383 101.1.1.62 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.90 62.0 7.09e-01 75.0% 100.0%
4980021 101.1.3.33 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.90 72.0 6.64e-01 85.7% 70.0%
4966195 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.90 67.0 6.14e-01 78.6% 71.4%
4979402 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.90 70.0 6.86e-01 96.4% 76.7%
4303963 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 72.0 6.45e-01 85.7% 65.3%
3795916 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.89 65.0 7.17e-01 80.4% 95.6%
3284984 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.89 70.0 4.42e-01 83.9% 18.9%
3908306 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.89 71.0 6.92e-01 94.6% 78.3%
3946049 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.89 73.0 7.75e-01 96.4% 98.0%
4577850 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.89 70.0 5.67e-01 83.9% 48.5%
4520564 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 71.0 6.15e-01 94.6% 58.7%
3860590 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.89 71.0 7.47e-01 94.6% 94.0%
3959252 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 74.0 7.24e-01 91.1% 83.3%
4238054 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.88 71.0 4.51e-01 85.7% 20.0%
1594930 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.88 70.0 7.37e-01 89.3% 94.0%
3569103 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.88 70.0 5.61e-01 94.6% 47.0%
3338153 101.1.1.64 ↗ alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.88 70.0 6.89e-01 85.7% 80.0%
None — 0.88 70.0 4.48e-01 85.7% 20.0%
3404418 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.88 66.0 6.03e-01 80.4% 62.9%
None — 0.88 71.0 5.69e-01 87.5% 51.4%
2448404 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.88 75.0 7.32e-01 91.1% 90.0%
3283374 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 76.0 6.21e-01 92.9% 55.8%
3279339 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.87 74.0 4.99e-01 91.1% 28.1%
3284051 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.87 68.0 6.47e-01 83.9% 72.3%
4541333 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.87 72.0 7.64e-01 100.0% 100.0%
4007596 101.1.2.139 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.87 70.0 7.34e-01 96.4% 96.0%
3873677 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.86 65.0 5.93e-01 82.1% 62.9%
4683276 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 72.0 5.90e-01 91.1% 52.6%
3401087 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.86 64.0 6.82e-01 80.4% 88.0%
3983411 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.86 67.0 6.01e-01 89.3% 61.3%
4197050 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.86 70.0 5.58e-01 87.5% 48.6%
3943462 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 75.0 7.57e-01 96.4% 96.4%
4683324 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.86 74.0 5.80e-01 92.9% 51.8%
3959876 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 71.0 5.76e-01 89.3% 51.0%
3279913 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 67.0 4.50e-01 83.9% 25.3%
3987867 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 71.0 7.50e-01 98.2% 100.0%
4604979 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.85 69.0 5.52e-01 87.5% 48.1%
None — 0.85 73.0 5.79e-01 92.9% 54.3%
None — 0.84 71.0 5.59e-01 91.1% 51.8%
4140444 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.84 73.0 5.70e-01 92.9% 51.8%
3589532 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 65.0 5.38e-01 83.9% 49.0%
4175748 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 76.0 6.68e-01 98.2% 75.0%
None — 0.84 72.0 5.68e-01 92.9% 52.3%
None — 0.84 72.0 5.67e-01 92.9% 51.8%
None — 0.84 72.0 5.94e-01 92.9% 60.0%
4102958 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.84 69.0 6.59e-01 98.2% 76.9%
3985633 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.83 66.0 6.72e-01 87.5% 92.7%
3974736 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 68.0 5.86e-01 89.3% 60.0%
4148347 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.81 69.0 5.54e-01 92.9% 54.8%
4437729 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.81 65.0 5.31e-01 87.5% 50.0%
4945932 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 74.0 6.09e-01 100.0% 87.4%
3587739 101.1.2.66 ↗ alpha arrays › HTH › HTH › winged helix domain › Mga 0.80 73.0 6.74e-01 100.0% 87.1%
5023952 101.1.2.888 ↗ alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 0.79 71.0 6.51e-01 100.0% 77.1%
5002651 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 64.0 5.33e-01 89.3% 82.1%
3963064 101.1.1.251 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.78 56.0 4.61e-01 80.4% 43.0%
4928203 2005.1.1.18 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.73 58.0 4.06e-01 89.3% 28.0%