←Back to structures

NC_024381.1__YP_009044367.1__HL17_gp32__00032

Bact-Vir

Identity

Accession:: NC_024381 ↗
Kingdom:: phage

Quality

71.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Septimatrevirus› Pseudomonas_phage_vB_PaeS_SCH_Ab26

TaxID: 1476390

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 103-160

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23791.2 best	DUF7173	44.4	2.50e-11	100.0%	36.7%

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1h2iA01	3.30.390.80	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22	0.69	43.0	3.15e-01	100.0%	25.0%
2wdoA00	3.90.470.20	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain	0.62	42.0	3.27e-01	70.7%	50.4%
2zdiB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.62	51.0	4.21e-01	100.0%	50.9%
1bd3A00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.59	48.0	3.23e-01	89.7%	46.4%
3g2fA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.58	32.0	2.84e-01	86.2%	33.3%
1hbxA01	3.40.1810.10	Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box	0.58	48.0	4.48e-01	93.1%	71.8%
1gcbA01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.57	48.0	2.89e-01	93.1%	96.2%
2pmzK00	3.90.940.10	Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega	0.57	38.0	3.43e-01	100.0%	50.0%
4k7cA01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.55	51.0	3.02e-01	100.0%	32.0%
3zbqA00	3.40.50.1440	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain	0.55	43.0	2.75e-01	87.9%	34.3%
2hlyA00	3.10.550.10	Alpha Beta › Roll › Atu2299-like › Hypothetical protein Atu2299	0.53	41.0	2.84e-01	86.2%	82.0%
4jpdA00	3.30.920.10	Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY	0.50	41.0	3.37e-01	91.4%	92.7%
3blzA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.50	39.0	3.17e-01	89.7%	98.4%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4243212	109.4.1.1297 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570	0.87	56.0	3.06e-01	100.0%	5.4%
3716174	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.85	56.0	4.42e-01	100.0%	36.4%
3194492	109.4.1.1297 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570	0.82	55.0	3.00e-01	100.0%	5.4%
3169544	3922.1.1.138 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Utp11	0.78	56.0	4.02e-01	75.9%	34.4%
3473115	3256.1.1.0 ↗	a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain	0.74	39.0	3.78e-01	87.9%	46.2%
4496501	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.67	56.0	3.44e-01	89.7%	64.4%
3553058	605.3.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Nonstructural protein ns2, Nep, M1-binding domain › Nonstructural protein ns2, Nep, M1-binding domain	0.66	60.0	4.46e-01	100.0%	45.0%
4595166	5076.2.1.0 ↗	alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ	0.60	55.0	3.62e-01	100.0%	68.4%
4125761	219.1.1.17 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1_2	0.54	49.0	3.14e-01	100.0%	45.5%
3684561	304.160.1.2 ↗	a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › Helitron_like_N	0.51	34.0	2.70e-01	70.7%	89.6%
3627290	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.51	38.0	3.37e-01	86.2%	58.9%
3211040	910.1.1.1 ↗	few secondary structure elements › Cysteine-rich DNA binding domain, (DM domain) › Cysteine-rich DNA binding domain, (DM domain) › Cysteine-rich DNA binding domain, (DM domain) › DM	0.50	39.0	3.60e-01	89.7%	64.9%

D2 medium residues 168-219

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23791.2 best	DUF7173	60.5	2.70e-16	96.2%	32.6%