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NC_024384.1__YP_009044671.1__LP030-3_025__00025

Bact-Vir

NC_024384.1__YP_009044671.1__LP030-3_025__00025

Identity

Accession:
NC_024384 ↗
Kingdom:
phage

Quality

94.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aquingentivirus› Listeria_phage_LP-030-3

TaxID: 1458852

Cluster

View cluster (31 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-59
PDB
Domain cluster: representative
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 5.77e-01 100.0% 62.7%
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.76 58.0 4.15e-01 84.9% 55.3%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.74 47.0 4.36e-01 86.8% 50.7%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.71 53.0 3.31e-01 81.1% 19.9%
2i1yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.70 53.0 3.39e-01 84.9% 34.5%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 60.0 4.45e-01 100.0% 46.0%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 51.0 4.86e-01 84.9% 86.4%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.67 51.0 3.29e-01 84.9% 21.9%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 49.0 3.99e-01 81.1% 44.8%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.67 53.0 3.87e-01 88.7% 93.2%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.66 54.0 5.22e-01 90.6% 81.4%
2vd5B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 52.0 3.57e-01 86.8% 72.2%
1golA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 56.0 4.19e-01 94.3% 64.1%
1j0wB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 54.0 4.47e-01 96.2% 84.5%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.65 52.0 4.97e-01 90.6% 75.0%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.65 51.0 5.14e-01 90.6% 88.5%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 45.0 4.26e-01 79.2% 59.7%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.65 51.0 5.04e-01 90.6% 83.9%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 55.0 3.57e-01 100.0% 61.3%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.64 54.0 4.54e-01 100.0% 59.8%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 4.71e-01 88.7% 90.9%
2r0cA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 53.0 3.48e-01 100.0% 48.6%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 48.0 4.71e-01 92.5% 78.0%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 52.0 4.41e-01 96.2% 92.4%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 46.0 3.47e-01 84.9% 57.0%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.61 47.0 3.97e-01 84.9% 61.1%
2cmgA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 47.0 4.83e-01 92.5% 92.2%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 51.0 3.08e-01 100.0% 34.6%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.61 52.0 3.50e-01 100.0% 27.2%
2qcuB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 52.0 3.45e-01 100.0% 57.6%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.60 52.0 4.34e-01 98.1% 91.5%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 43.0 3.51e-01 79.2% 71.2%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.38e-01 96.2% 85.5%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.60 38.0 3.02e-01 88.7% 32.7%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.60 50.0 4.13e-01 92.5% 76.8%
1uirA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.60 45.0 4.53e-01 92.5% 88.5%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.60 48.0 3.77e-01 94.3% 91.9%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.66e-01 92.5% 95.2%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 49.0 2.98e-01 100.0% 34.1%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 47.0 4.45e-01 92.5% 81.8%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.58 50.0 3.31e-01 98.1% 74.3%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 46.0 4.41e-01 100.0% 92.6%
7vljA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 48.0 4.03e-01 96.2% 80.6%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.57 43.0 4.40e-01 88.7% 92.2%
1o97D01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 48.0 3.36e-01 100.0% 32.8%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.57 42.0 4.11e-01 88.7% 89.1%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 47.0 3.00e-01 96.2% 39.4%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 46.0 4.26e-01 100.0% 78.4%
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.56 39.0 3.54e-01 75.5% 60.0%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 36.0 3.72e-01 79.2% 80.0%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 42.0 3.93e-01 98.1% 68.2%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 42.0 2.63e-01 86.8% 88.3%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 40.0 3.90e-01 84.9% 75.4%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.54 42.0 3.67e-01 90.6% 96.6%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.54 44.0 3.57e-01 96.2% 80.5%
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 37.0 3.27e-01 75.5% 64.8%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 4.29e-01 100.0% 94.3%
1ejfA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 43.0 3.56e-01 96.2% 55.5%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.54 38.0 2.96e-01 77.4% 89.5%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.54 44.0 3.14e-01 100.0% 27.7%
4huzA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 36.0 2.72e-01 75.5% 77.7%
1xm8A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 37.0 2.45e-01 75.5% 81.9%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 39.0 3.78e-01 83.0% 72.1%
3fetA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 43.0 3.21e-01 100.0% 37.0%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.52 42.0 3.47e-01 96.2% 50.9%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.52 40.0 4.12e-01 84.9% 88.2%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 44.0 3.49e-01 100.0% 46.2%
2uvaG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 42.0 3.24e-01 96.2% 73.5%
3mtsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 36.0 3.56e-01 81.1% 71.0%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 43.0 3.96e-01 100.0% 79.2%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.50 40.0 3.01e-01 94.3% 39.1%
2l8oA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 36.0 2.84e-01 83.0% 62.5%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4250402 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.95 73.0 7.91e-01 84.9% 95.6%
3992385 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 57.0 4.93e-01 81.1% 52.5%
3177048 719.2.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.75 52.0 4.29e-01 73.6% 75.8%
3239140 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.72 60.0 3.75e-01 94.3% 21.0%
5061515 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 59.0 4.75e-01 96.2% 96.2%
4521197 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.69 50.0 4.87e-01 79.2% 88.3%
5001282 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 49.0 3.55e-01 75.5% 89.7%
3281300 4.1.1.426 ↗ beta barrels › SH3 › SH3 › SH3 › PF31188 0.68 58.0 5.51e-01 100.0% 93.8%
5071787 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.68 51.0 3.88e-01 83.0% 39.2%
3668547 246.3.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.68 53.0 3.45e-01 86.8% 56.7%
3994068 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 56.0 3.49e-01 94.3% 20.7%
4086268 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.67 51.0 4.36e-01 84.9% 57.8%
3841474 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.67 49.0 3.05e-01 79.2% 26.1%
4426764 2.4.1.12 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.67 52.0 4.16e-01 92.5% 43.7%
4026222 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 56.0 4.18e-01 100.0% 64.8%
3163776 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.66 50.0 3.78e-01 83.0% 42.3%
4325086 2.4.1.11 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 0.66 51.0 4.11e-01 92.5% 43.7%
4076295 375.1.1.88 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ogr_Delta 0.66 46.0 4.56e-01 73.6% 89.1%
3576886 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.66 54.0 3.37e-01 92.5% 20.3%
4334562 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.66 50.0 3.83e-01 84.9% 40.8%
4599427 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.65 56.0 4.30e-01 100.0% 70.8%
4935792 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.65 56.0 4.04e-01 100.0% 65.6%
4618920 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.65 48.0 3.65e-01 79.2% 33.8%
4329624 2.4.1.12 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.65 48.0 3.95e-01 83.0% 49.5%
421 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.65 47.0 4.21e-01 79.2% 54.5%
3596265 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 54.0 4.54e-01 100.0% 65.0%
4268790 2.4.1.12 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.64 48.0 3.67e-01 83.0% 40.8%
5005811 3414.1.1.0 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.64 50.0 4.39e-01 86.8% 93.8%
4954981 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.63 43.0 3.08e-01 71.7% 42.9%
3947541 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.63 46.0 4.71e-01 79.2% 84.0%
4930329 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 43.0 4.42e-01 77.4% 76.0%
2834342 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.63 51.0 4.75e-01 90.6% 85.3%
3821886 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.63 45.0 4.02e-01 75.5% 56.0%
4587696 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.63 52.0 4.23e-01 92.5% 54.0%
4187163 2.4.1.12 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.63 46.0 3.71e-01 83.0% 46.1%
4436471 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.63 49.0 3.94e-01 92.5% 43.8%
5052753 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.63 54.0 3.89e-01 100.0% 71.9%
3256904 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.62 52.0 4.03e-01 96.2% 78.4%
5060010 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 42.0 4.52e-01 71.7% 100.0%
4938919 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.92e-01 100.0% 78.5%
4017732 220.1.1.202 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N 0.61 47.0 3.47e-01 86.8% 33.3%
3804177 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.61 52.0 3.81e-01 96.2% 70.3%
4444537 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.61 45.0 3.67e-01 83.0% 45.0%
3702817 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.61 50.0 3.86e-01 96.2% 76.1%
3896484 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.61 50.0 4.03e-01 100.0% 52.5%
5083665 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.61 47.0 3.90e-01 84.9% 96.8%
5000651 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.61 45.0 2.72e-01 84.9% 11.0%
3879132 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 50.0 4.61e-01 100.0% 81.3%
3624750 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.61 50.0 4.06e-01 96.2% 53.6%
3273300 3270.1.1.1 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.61 52.0 4.41e-01 98.1% 70.0%
3698791 3699.1.1.1 ↗ beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.61 46.0 4.33e-01 90.6% 81.4%
3561094 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 50.0 4.57e-01 100.0% 81.3%
3785352 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.60 50.0 3.62e-01 96.2% 75.8%
3234647 69.1.2.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › AXH › AXH 0.60 49.0 3.89e-01 92.5% 92.1%
5021205 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.60 48.0 3.71e-01 92.5% 46.9%
3476907 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.60 50.0 3.08e-01 94.3% 26.9%
4936051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 5.10e-01 100.0% 94.5%
3171604 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 49.0 4.53e-01 100.0% 85.3%
4038410 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.59 50.0 3.73e-01 96.2% 78.6%
4636455 375.1.1.299 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.59 46.0 4.90e-01 84.9% 100.0%
3221233 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 43.0 4.56e-01 83.0% 93.3%
3597091 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.59 49.0 3.82e-01 96.2% 75.0%
5078494 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.59 48.0 3.81e-01 96.2% 76.0%
3939755 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.59 48.0 3.58e-01 94.3% 80.4%
5052550 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.59 51.0 3.90e-01 98.1% 76.8%
3397928 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.59 50.0 3.84e-01 96.2% 79.2%
4025728 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.59 50.0 3.93e-01 96.2% 74.8%
4934001 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.59 48.0 3.80e-01 96.2% 76.8%
4943404 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.59 48.0 3.72e-01 94.3% 86.2%
3719143 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.59 48.0 3.66e-01 94.3% 75.6%
3935357 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 49.0 3.89e-01 100.0% 51.7%
4057742 2.4.1.11 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 0.58 47.0 4.51e-01 96.2% 81.5%
162047 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.58 48.0 3.72e-01 96.2% 74.0%
5035742 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 49.0 4.77e-01 100.0% 91.7%
143267 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.55 46.0 3.56e-01 96.2% 74.0%
4945471 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 44.0 4.15e-01 92.5% 72.3%
3942998 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.55 43.0 4.15e-01 100.0% 82.9%
3929043 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.55 44.0 3.22e-01 100.0% 29.1%
3473978 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.55 44.0 3.63e-01 96.2% 57.3%
4031833 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 45.0 4.34e-01 92.5% 83.3%
4126006 325.1.7.14 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RPOC_hybrid 0.54 41.0 3.94e-01 88.7% 72.3%
3615649 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.87e-01 96.2% 80.0%
4998507 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 42.0 4.21e-01 96.2% 87.0%
4081797 3860.1.1.158 ↗ alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE 0.53 45.0 3.33e-01 98.1% 55.2%
4064214 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 39.0 3.74e-01 92.5% 73.8%
5029736 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.51 44.0 3.42e-01 100.0% 64.0%
3966247 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.51 39.0 3.77e-01 92.5% 75.4%
3982411 275.1.1.0 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase 0.51 39.0 3.74e-01 92.5% 75.4%
3979564 4246.1.1.0 ↗ a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit 0.51 39.0 3.74e-01 92.5% 75.4%