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NC_024390.1__YP_009044975.1__HL59_gp21__00021
Bact-VirNC_024390.1__YP_009044975.1__HL59_gp21__00021
Identity
- Accession:
- NC_024390 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Taxonomy
TaxID: 1262515
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 144-201
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.82 | 59.0 | 6.26e-01 | 100.0% | 86.3% |
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.78 | 67.0 | 5.53e-01 | 100.0% | 55.8% |
| 1wxrA03 | 3.30.160.280 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.73 | 60.0 | 5.55e-01 | 100.0% | 69.7% |
| 3e1sA04 | 2.30.30.940 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 4.31e-01 | 96.6% | 68.1% |
| 1i1qB00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.59 | 45.0 | 3.29e-01 | 87.9% | 39.2% |
| 4k4kA01 | 2.60.40.2620 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.58 | 43.0 | 3.40e-01 | 93.1% | 37.0% |
| 4c65B01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.56 | 40.0 | 3.22e-01 | 75.9% | 58.6% |
| 2vatL00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 40.0 | 2.49e-01 | 82.8% | 27.9% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 3.38e-01 | 94.8% | 44.4% |
| 5w8oA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 39.0 | 2.48e-01 | 84.5% | 26.1% |
| 4qloA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 38.0 | 2.46e-01 | 84.5% | 27.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4009007 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.79 | 59.0 | 6.28e-01 | 98.3% | 92.0% |
| 4994824 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.68 | 43.0 | 4.56e-01 | 86.2% | 74.0% |
| 5034724 | 4.1.1.482 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4314 | 0.58 | 41.0 | 4.17e-01 | 86.2% | 80.0% |
| 3514608 | 2.1.1.41 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_N_C | 0.57 | 47.0 | 3.76e-01 | 94.8% | 80.8% |
| 3207104 | 3887.1.1.0 ↗ | a+b two layers › Yeast killer toxin-like › Yeast killer toxin-like › Yeast killer toxin-like | 0.55 | 46.0 | 3.82e-01 | 98.3% | 82.3% |
| 2067746 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.55 | 42.0 | 2.60e-01 | 84.5% | 27.8% |
| 5075134 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 3.23e-01 | 79.3% | 73.3% |
| 3252646 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.54 | 49.0 | 3.67e-01 | 100.0% | 63.6% |
| 4992532 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 37.0 | 3.72e-01 | 84.5% | 70.0% |
| 2581401 | 4182.2.1.1 ↗ | beta sandwiches › Agglutinin HPA-like › CofB C-terminal domain › CofB C-terminal domain › CofB_C | 0.54 | 38.0 | 2.99e-01 | 75.9% | 88.2% |
| 4198933 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.54 | 41.0 | 2.54e-01 | 84.5% | 25.9% |
| 4524424 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.53 | 40.0 | 2.53e-01 | 82.8% | 29.0% |
| 4343344 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.52 | 39.0 | 2.43e-01 | 82.8% | 23.4% |
| 3720824 | 7579.1.1.92 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Abhydrolase_6 | 0.52 | 39.0 | 2.43e-01 | 82.8% | 22.7% |
| 4952860 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.52 | 39.0 | 2.52e-01 | 84.5% | 28.6% |
| 3491696 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 2.89e-01 | 79.3% | 80.0% |
| 273 | 1.10.1.1 ↗ | beta barrels › cradle loop barrel › HI0933 barrel domain-like › HI0933 barrel domain-like › HI0933_like_1st | 0.52 | 37.0 | 3.39e-01 | 91.4% | 57.1% |
| 1324132 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.51 | 38.0 | 2.47e-01 | 84.5% | 27.8% |
| 3946832 | 236.1.1.9 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_zinc_N | 0.51 | 39.0 | 2.67e-01 | 91.4% | 20.8% |
D2
high
residues 202-297
Domain cluster:
rep: MT006234.1__QIG78036.1__BRUR0010001c01_00005__00005__D199-308
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.82 | 76.0 | 7.44e-01 | 100.0% | 97.1% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.81 | 75.0 | 7.22e-01 | 100.0% | 96.3% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.77 | 38.0 | 3.50e-01 | 100.0% | 37.5% |
| 1uxbA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.74 | 66.0 | 5.33e-01 | 97.9% | 98.4% |
| 2fsdA00 | 2.60.40.2460 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage bIL170 RBP, head domain | 0.70 | 62.0 | 5.99e-01 | 97.9% | 98.2% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.69 | 36.0 | 4.48e-01 | 95.8% | 81.7% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.69 | 36.0 | 3.35e-01 | 100.0% | 40.8% |
| 2wc7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.67 | 51.0 | 5.52e-01 | 99.0% | 98.7% |
| 5brqA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 51.0 | 5.52e-01 | 95.8% | 98.8% |
| 1uokA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 50.0 | 5.45e-01 | 95.8% | 100.0% |
| 4e2oA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 51.0 | 5.33e-01 | 96.9% | 92.0% |
| 1gjwA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 43.0 | 5.00e-01 | 96.9% | 95.6% |
| 1cgtA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 54.0 | 5.52e-01 | 100.0% | 96.8% |
| 4aieA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 45.0 | 5.03e-01 | 95.8% | 100.0% |
| 2ze0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 48.0 | 5.14e-01 | 95.8% | 98.7% |
| 5zceA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 47.0 | 5.12e-01 | 95.8% | 100.0% |
| 3kl0D01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 52.0 | 5.12e-01 | 99.0% | 85.8% |
| 5do8B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 45.0 | 4.89e-01 | 96.9% | 97.4% |
| 1m53A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 46.0 | 4.93e-01 | 96.9% | 100.0% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.61 | 34.0 | 2.74e-01 | 97.9% | 28.7% |
| 5e1qA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 53.0 | 5.38e-01 | 97.9% | 100.0% |
| 3aj7A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 45.0 | 4.94e-01 | 96.9% | 100.0% |
| 3zssA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 52.0 | 5.33e-01 | 95.8% | 100.0% |
| 6phxA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 52.0 | 5.30e-01 | 99.0% | 96.8% |
| 7jjtA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 47.0 | 4.92e-01 | 100.0% | 94.3% |
| 2aaaA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 50.0 | 4.93e-01 | 100.0% | 89.2% |
| 2qziA00 | 3.40.1720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Streptococcus thermophilus LMG 18311 protein like › Streptococcus thermophilus LMG 18311 protein like | 0.58 | 43.0 | 4.29e-01 | 99.0% | 75.2% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.56 | 45.0 | 3.41e-01 | 89.6% | 75.8% |
| 1nkgA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 46.0 | 3.57e-01 | 100.0% | 84.1% |
| 2oyzA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 48.0 | 4.84e-01 | 96.9% | 100.0% |
| 1hn0A03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 48.0 | 3.50e-01 | 100.0% | 91.8% |
| 1pzsA00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.53 | 46.0 | 3.84e-01 | 95.8% | 63.2% |
| 6u7jA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.95e-01 | 95.8% | 83.1% |
| 4ozxA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.22e-01 | 97.9% | 96.5% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 45.0 | 4.06e-01 | 100.0% | 77.5% |
| 3w7tA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.51 | 43.0 | 3.36e-01 | 97.9% | 83.6% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.51 | 28.0 | 3.22e-01 | 96.9% | 71.8% |
| 2v7sA00 | 3.30.2030.20 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.50 | 43.0 | 3.67e-01 | 100.0% | 76.9% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588455 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.81 | 34.0 | 3.95e-01 | 96.9% | 54.3% |
| 2998372 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.79 | 36.0 | 4.83e-01 | 99.0% | 81.1% |
| 5791 | 295.1.1.6 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 | 0.74 | 38.0 | 3.53e-01 | 100.0% | 40.3% |
| 3990496 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.73 | 34.0 | 4.02e-01 | 97.9% | 62.9% |
| 5035423 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.73 | 36.0 | 3.84e-01 | 100.0% | 54.1% |
| 1487334 | 5092.1.1.7 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fibre_HD | 0.73 | 66.0 | 6.17e-01 | 100.0% | 90.5% |
| 3955351 | 12.6.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C | 0.70 | 41.0 | 5.05e-01 | 99.0% | 93.3% |
| 3587134 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.69 | 38.0 | 4.84e-01 | 97.9% | 94.5% |
| 5792 | 295.1.1.6 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 | 0.69 | 36.0 | 3.34e-01 | 100.0% | 40.5% |
| 3707402 | 12.6.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C | 0.68 | 42.0 | 4.71e-01 | 99.0% | 80.0% |
| 3613138 | 12.6.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C | 0.67 | 41.0 | 4.68e-01 | 100.0% | 82.9% |
| 3479716 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.67 | 33.0 | 3.47e-01 | 96.9% | 51.8% |
| 5026277 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.66 | 41.0 | 5.01e-01 | 95.8% | 100.0% |
| 4950402 | 881.4.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB | 0.65 | 32.0 | 2.86e-01 | 100.0% | 33.1% |
| 4082072 | 12.1.1.22 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GH97_C | 0.65 | 55.0 | 5.53e-01 | 97.9% | 93.7% |
| 3060721 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.65 | 41.0 | 4.39e-01 | 99.0% | 74.4% |
| 1171964 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.64 | 28.0 | 3.57e-01 | 95.8% | 67.2% |
| 3793430 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.62 | 34.0 | 3.43e-01 | 100.0% | 53.7% |
| 3367922 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.61 | 44.0 | 4.45e-01 | 99.0% | 74.7% |
| 4827216 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.61 | 37.0 | 3.83e-01 | 99.0% | 63.3% |
| 5014277 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.59 | 31.0 | 3.26e-01 | 96.9% | 54.1% |
| 3468140 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.59 | 40.0 | 4.17e-01 | 99.0% | 75.6% |
| 3367441 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 41.0 | 4.07e-01 | 97.9% | 69.7% |
| 2027 | 12.3.1.17 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › RhgB_N | 0.55 | 47.0 | 3.59e-01 | 100.0% | 84.4% |
| 3584281 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.54 | 47.0 | 3.45e-01 | 100.0% | 77.6% |
| 3223040 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.54 | 47.0 | 3.55e-01 | 100.0% | 85.5% |
| 3962450 | 9.27.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › LpqH › LpqH | 0.53 | 40.0 | 3.91e-01 | 79.2% | 81.9% |
| 3590243 | 6044.1.1.1 ↗ | a+b three layers › DUF1827-like › DUF1827-like › DUF1827-like › DUF1827 | 0.53 | 44.0 | 4.28e-01 | 100.0% | 82.9% |
| 3953943 | 9.27.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa | 0.53 | 39.0 | 3.74e-01 | 78.1% | 78.2% |
| 3474457 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 34.0 | 3.47e-01 | 77.1% | 68.4% |
| 3894207 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.50 | 37.0 | 3.21e-01 | 78.1% | 55.2% |
| 4989818 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.50 | 42.0 | 3.35e-01 | 96.9% | 86.4% |
| 5014493 | 331.3.1.12 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like | 0.50 | 41.0 | 3.18e-01 | 91.7% | 45.2% |
| 3789064 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.50 | 38.0 | 2.53e-01 | 79.2% | 23.1% |
| 4945114 | 4252.1.1.10 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 | 0.50 | 40.0 | 3.16e-01 | 86.5% | 73.5% |
| 3739528 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.50 | 39.0 | 3.09e-01 | 84.4% | 63.9% |
D3
medium
residues 7-68
Domain cluster:
rep: IMGVR_UViG_3300026311_000146-3300026311-Ga0209723_10064731__D4-70
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zruC01 | 2.60.520.10 | Mainly Beta › Sandwich › Triple-stranded beta-helix › Phage fibre proteins | 0.59 | 47.0 | 3.78e-01 | 95.2% | 43.1% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 27.0 | 2.64e-01 | 77.4% | 42.3% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 29.0 | 3.15e-01 | 77.4% | 66.0% |
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.50 | 28.0 | 3.17e-01 | 71.0% | 68.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589732 | 4166.1.1.2 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Caudo_bapla_N | 0.68 | 61.0 | 4.46e-01 | 98.4% | 38.7% |
| 4147724 | 3523.1.1.2 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptD_N | 0.54 | 45.0 | 3.18e-01 | 100.0% | 30.2% |
D4
medium
residues 69-137
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4l9bA01 | 2.60.520.10 | Mainly Beta › Sandwich › Triple-stranded beta-helix › Phage fibre proteins | 0.78 | 69.0 | 5.30e-01 | 100.0% | 55.8% |
| 1b33N01 | 3.30.1490.170 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Allophycocyanin linker chain (domain) | 0.51 | 38.0 | 4.11e-01 | 78.3% | 98.2% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.50 | 35.0 | 3.76e-01 | 82.6% | 86.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589732 | 4166.1.1.2 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Caudo_bapla_N | 0.82 | 74.0 | 5.66e-01 | 100.0% | 51.6% |
| 2772521 | 11.14.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 › AglB_L1 | 0.51 | 40.0 | 3.75e-01 | 94.2% | 66.3% |
| 3712543 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 43.0 | 3.75e-01 | 92.8% | 64.8% |
| 4973060 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 32.0 | 2.89e-01 | 94.2% | 44.0% |