←Back to structures
NC_024391.1__YP_009045021.1__HL47_gp28__00028
Bact-VirNC_024391.1__YP_009045021.1__HL47_gp28__00028
Identity
- Accession:
- NC_024391 ↗
- Kingdom:
- phage
Quality
91.1
mean pLDDT
Taxonomy
TaxID: 1464127
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-86
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.74 | 43.0 | 3.89e-01 | 86.4% | 44.7% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 49.0 | 4.31e-01 | 87.9% | 48.9% |
| 3dmqA08 | 6.10.140.1500 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 57.0 | 5.36e-01 | 97.0% | 75.0% |
| 2qm8A03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.63 | 49.0 | 4.97e-01 | 83.3% | 86.2% |
| 3mhsB00 | 1.10.246.140 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 | 0.63 | 38.0 | 3.40e-01 | 71.2% | 44.0% |
| 2p67A03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.62 | 46.0 | 4.70e-01 | 78.8% | 90.8% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 45.0 | 3.96e-01 | 81.8% | 58.4% |
| 3sqnA02 | 1.10.1790.40 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › | 0.51 | 35.0 | 2.89e-01 | 72.7% | 82.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3798232 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.81 | 71.0 | 6.42e-01 | 97.0% | 76.1% |
| 3698292 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.80 | 73.0 | 5.57e-01 | 100.0% | 47.6% |
| 4532729 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.79 | 69.0 | 5.98e-01 | 100.0% | 62.9% |
| None | — | 0.77 | 59.0 | 3.37e-01 | 80.3% | 10.5% | |
| 3321923 | 603.2.1.16 ↗ | alpha bundles › STAT-like › STAT › STAT › DUF3537 | 0.70 | 61.0 | 3.95e-01 | 97.0% | 81.0% |
| 4148347 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.64 | 47.0 | 4.13e-01 | 80.3% | 52.9% |