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NC_024392.1__YP_009045170.1__LP114_116__00115
Bact-VirNC_024392.1__YP_009045170.1__LP114_116__00115
Identity
- Accession:
- NC_024392 ↗
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Taxonomy
TaxID: 1458857
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-99
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cxeC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 46.0 | 4.58e-01 | 100.0% | 68.4% |
| 7sf2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 44.0 | 4.44e-01 | 100.0% | 69.9% |
| 2q7nA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 48.0 | 4.55e-01 | 98.9% | 68.2% |
| 6kxkG01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.63 | 50.0 | 4.49e-01 | 100.0% | 61.7% |
| 2ic2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 44.0 | 4.30e-01 | 100.0% | 68.3% |
| 5h4zA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.59 | 42.0 | 3.82e-01 | 100.0% | 54.3% |
| 3n08B00 | 3.90.280.10 | Alpha Beta › Alpha-Beta Complex › Phosphatidylethanolamine-binding Protein › PEBP-like | 0.57 | 50.0 | 4.30e-01 | 100.0% | 71.2% |
| 1a44A00 | 3.90.280.10 | Alpha Beta › Alpha-Beta Complex › Phosphatidylethanolamine-binding Protein › PEBP-like | 0.56 | 49.0 | 4.01e-01 | 100.0% | 58.9% |
| 4xl1E01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 49.0 | 4.18e-01 | 100.0% | 60.0% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.51 | 36.0 | 3.42e-01 | 100.0% | 61.1% |
| 2wllA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.51 | 43.0 | 3.74e-01 | 100.0% | 60.0% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.53e-01 | 100.0% | 69.0% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 36.0 | 3.66e-01 | 75.5% | 74.7% |
| 7alkA01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 44.0 | 3.74e-01 | 100.0% | 57.5% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5027845 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 51.0 | 4.87e-01 | 100.0% | 65.7% |
| 3797683 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 46.0 | 4.18e-01 | 100.0% | 52.0% |
| 3478312 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 47.0 | 4.58e-01 | 100.0% | 63.8% |
| 4970315 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 47.0 | 4.46e-01 | 100.0% | 66.4% |
| 5039465 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.62 | 41.0 | 3.96e-01 | 100.0% | 60.0% |
| 4942285 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 4.71e-01 | 100.0% | 94.7% |
| 3517819 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.57 | 43.0 | 4.25e-01 | 100.0% | 74.0% |
| 3273772 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 4.46e-01 | 97.9% | 91.1% |
| 3923997 | 11.1.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Zona_pellucida | 0.57 | 50.0 | 4.27e-01 | 100.0% | 69.4% |
| 3730546 | 11.2.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF29592 | 0.56 | 39.0 | 3.34e-01 | 100.0% | 46.9% |
| 3596829 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 39.0 | 3.63e-01 | 72.3% | 93.9% |
| 3738686 | 11.1.7.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › PEBP-like › PBP | 0.53 | 47.0 | 3.38e-01 | 100.0% | 36.6% |
| 3634643 | 11.1.7.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › PEBP-like | 0.53 | 47.0 | 3.88e-01 | 100.0% | 58.9% |
| 3244144 | 11.1.7.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › PEBP-like › PBP | 0.52 | 43.0 | 3.17e-01 | 93.6% | 58.6% |
| 3626690 | 11.1.7.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › PEBP-like › PBP | 0.51 | 45.0 | 4.35e-01 | 100.0% | 98.1% |
| 3272455 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 36.0 | 3.18e-01 | 100.0% | 49.3% |
| 3632608 | 3156.1.1.14 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › hGDE_N | 0.51 | 44.0 | 3.96e-01 | 100.0% | 68.5% |
| 3460133 | 11.2.1.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF1005 | 0.50 | 45.0 | 3.70e-01 | 100.0% | 56.6% |