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NC_024792.1__YP_009056279.1__LD13_gp010__00010

Bact-Vir

NC_024792.1__YP_009056279.1__LD13_gp010__00010

Identity

Accession:
NC_024792 ↗
Kingdom:
phage

Quality

80.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-134
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1eotA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 33.0 3.71e-01 77.0% 68.9%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 29.0 3.37e-01 70.0% 69.7%
1plsA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 31.0 3.05e-01 77.0% 52.2%
6vddD01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 40.0 3.27e-01 83.0% 89.6%
2ls5A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 36.0 3.20e-01 76.0% 77.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3597539 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 43.0 3.08e-01 86.0% 72.5%
3784559 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 35.0 3.25e-01 78.0% 53.8%