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NC_025423.1__YP_009099120.1__OZ73_gp076__00076
Bact-VirNC_025423.1__YP_009099120.1__OZ73_gp076__00076
Identity
- Accession:
- NC_025423 ↗
- Kingdom:
- phage
Quality
90.5
mean pLDDT
Taxonomy
TaxID: 1391188
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-130
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 60.0 | 5.62e-01 | 75.7% | 59.5% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 59.0 | 5.49e-01 | 76.6% | 57.6% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 60.0 | 5.35e-01 | 79.4% | 54.2% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 54.0 | 6.07e-01 | 72.9% | 82.1% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 55.0 | 5.08e-01 | 79.4% | 54.1% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 55.0 | 4.88e-01 | 75.7% | 49.3% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 56.0 | 5.74e-01 | 77.6% | 72.1% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 59.0 | 6.06e-01 | 83.2% | 76.9% |
| 3b73B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 56.0 | 6.09e-01 | 80.4% | 84.3% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 57.0 | 6.21e-01 | 72.0% | 89.9% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 60.0 | 6.10e-01 | 75.7% | 79.6% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 56.0 | 5.55e-01 | 72.9% | 67.9% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 57.0 | 4.98e-01 | 79.4% | 51.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 56.0 | 5.66e-01 | 72.9% | 72.4% |
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 59.0 | 6.41e-01 | 81.3% | 91.0% |
| 4g6qA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 59.0 | 6.46e-01 | 82.2% | 93.1% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 57.0 | 6.55e-01 | 83.2% | 100.0% |
| 2fswA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 60.0 | 6.19e-01 | 82.2% | 82.4% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 56.0 | 5.89e-01 | 72.9% | 82.3% |
| 2pg4A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 58.0 | 6.30e-01 | 78.5% | 91.2% |
| 2oqgB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 56.0 | 5.66e-01 | 81.3% | 74.1% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 60.0 | 6.14e-01 | 82.2% | 82.9% |
| 3u1dB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 5.72e-01 | 86.9% | 92.3% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 57.0 | 6.24e-01 | 81.3% | 92.2% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 55.0 | 5.64e-01 | 73.8% | 77.7% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 55.0 | 5.54e-01 | 73.8% | 75.5% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 54.0 | 6.04e-01 | 76.6% | 96.3% |
| 1fokA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 48.0 | 5.25e-01 | 72.9% | 79.3% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 53.0 | 5.96e-01 | 74.8% | 95.1% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 56.0 | 5.24e-01 | 78.5% | 72.1% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 53.0 | 6.00e-01 | 75.7% | 97.6% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 54.0 | 5.54e-01 | 75.7% | 82.5% |
| 6j0eB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 58.0 | 5.66e-01 | 82.2% | 75.2% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 5.55e-01 | 72.0% | 89.0% |
| 4rayA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 51.0 | 5.63e-01 | 75.7% | 90.6% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 52.0 | 5.62e-01 | 73.8% | 94.4% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 52.0 | 5.11e-01 | 73.8% | 71.3% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 59.0 | 6.02e-01 | 86.0% | 94.2% |
| 4kt5C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 49.0 | 5.36e-01 | 72.0% | 85.2% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 53.0 | 5.14e-01 | 78.5% | 69.2% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 4.97e-01 | 78.5% | 79.2% |
| 1vtnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 47.0 | 4.87e-01 | 72.0% | 82.4% |
| 1xb4B01 | 1.10.10.570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" | 0.67 | 47.0 | 4.77e-01 | 71.0% | 77.9% |
| 2l2oA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.65 | 47.0 | 5.18e-01 | 74.8% | 97.6% |
| 7lzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 43.0 | 4.68e-01 | 73.8% | 83.3% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 47.0 | 4.59e-01 | 78.5% | 72.2% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.62 | 46.0 | 3.43e-01 | 79.4% | 56.6% |
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.54 | 38.0 | 4.14e-01 | 88.8% | 89.7% |
| 1yx0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 33.0 | 2.95e-01 | 79.4% | 45.0% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 26.0 | 2.77e-01 | 80.4% | 50.5% |
| 3k59A02 | 3.30.70.2250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif | 0.52 | 28.0 | 3.41e-01 | 70.1% | 82.1% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.50 | 33.0 | 3.21e-01 | 72.0% | 58.7% |
| 4v19R01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.50 | 31.0 | 3.08e-01 | 72.9% | 58.0% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5016560 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 63.0 | 6.74e-01 | 76.6% | 87.4% |
| 4994432 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 61.0 | 6.22e-01 | 75.7% | 75.2% |
| 5066984 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.84 | 61.0 | 6.99e-01 | 74.8% | 100.0% |
| 3269500 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 57.0 | 5.98e-01 | 70.1% | 77.8% |
| 4991088 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 55.0 | 6.28e-01 | 82.2% | 90.0% |
| 5035685 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.83 | 60.0 | 5.65e-01 | 73.8% | 66.9% |
| 5078403 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.83 | 57.0 | 6.73e-01 | 72.9% | 100.0% |
| 5082509 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.83 | 61.0 | 5.64e-01 | 75.7% | 92.3% |
| 4944350 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 57.0 | 6.40e-01 | 75.7% | 90.4% |
| 4938741 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.82 | 65.0 | 5.91e-01 | 83.2% | 66.4% |
| 5030289 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 56.0 | 6.45e-01 | 72.0% | 93.8% |
| 3963083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 57.0 | 5.25e-01 | 72.0% | 60.7% |
| 5036586 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 59.0 | 6.60e-01 | 74.8% | 94.1% |
| 5041543 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.81 | 57.0 | 5.17e-01 | 74.8% | 55.0% |
| 4980261 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 64.0 | 6.55e-01 | 83.2% | 87.6% |
| 4983791 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.81 | 62.0 | 5.74e-01 | 79.4% | 65.4% |
| 3285760 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.80 | 58.0 | 4.76e-01 | 73.8% | 47.8% |
| 3941591 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 59.0 | 6.58e-01 | 75.7% | 100.0% |
| 5075560 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 63.0 | 5.46e-01 | 82.2% | 69.7% |
| 5076520 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 62.0 | 6.44e-01 | 81.3% | 88.0% |
| 4932062 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.79 | 59.0 | 6.13e-01 | 79.4% | 83.0% |
| 4959599 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.79 | 57.0 | 5.57e-01 | 73.8% | 72.8% |
| 4966558 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 56.0 | 6.17e-01 | 73.8% | 91.8% |
| 4978533 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.79 | 57.0 | 5.22e-01 | 74.8% | 63.7% |
| 5018390 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 55.0 | 5.35e-01 | 74.8% | 65.5% |
| 4966215 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 57.0 | 4.87e-01 | 78.5% | 49.1% |
| 5071263 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 59.0 | 6.40e-01 | 80.4% | 93.3% |
| 4978855 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.77 | 55.0 | 5.30e-01 | 72.9% | 66.7% |
| None | — | 0.77 | 58.0 | 5.91e-01 | 82.2% | 79.0% | |
| 3958859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 53.0 | 6.06e-01 | 72.9% | 95.0% |
| 3493459 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.77 | 51.0 | 5.66e-01 | 73.8% | 84.7% |
| 5075771 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.77 | 55.0 | 5.44e-01 | 72.9% | 73.6% |
| 3467443 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.77 | 58.0 | 5.73e-01 | 79.4% | 76.5% |
| 3602412 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 53.0 | 5.36e-01 | 70.1% | 94.3% |
| 3938245 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.77 | 57.0 | 4.47e-01 | 77.6% | 81.8% |
| 3280969 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.77 | 56.0 | 5.82e-01 | 75.7% | 82.0% |
| 5059914 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 58.0 | 5.97e-01 | 78.5% | 85.0% |
| 3898882 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 57.0 | 5.57e-01 | 77.6% | 87.0% |
| 5052844 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.76 | 61.0 | 4.88e-01 | 85.0% | 44.9% |
| None | — | 0.76 | 57.0 | 4.67e-01 | 77.6% | 93.5% | |
| 3550392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 57.0 | 4.65e-01 | 77.6% | 93.5% |
| 4508433 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.76 | 54.0 | 3.66e-01 | 74.8% | 21.1% |
| 4933184 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.76 | 57.0 | 5.96e-01 | 81.3% | 85.0% |
| 5027566 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 52.0 | 5.77e-01 | 72.0% | 89.4% |
| None | — | 0.74 | 54.0 | 3.65e-01 | 75.7% | 21.9% | |
| 4004118 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.74 | 58.0 | 4.73e-01 | 81.3% | 93.5% |
| 3741614 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.74 | 57.0 | 4.87e-01 | 80.4% | 54.5% |
| 4025377 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 51.0 | 5.63e-01 | 70.1% | 97.6% |
| 4934296 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 52.0 | 5.33e-01 | 72.9% | 75.2% |
| 4081599 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.73 | 57.0 | 5.64e-01 | 80.4% | 81.8% |
| 4947062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 56.0 | 5.95e-01 | 79.4% | 89.5% |
| 3468223 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.73 | 57.0 | 3.91e-01 | 81.3% | 40.0% |
| 4190752 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.73 | 56.0 | 5.94e-01 | 80.4% | 94.7% |
| 4997255 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 57.0 | 5.89e-01 | 83.2% | 93.0% |
| 4969221 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.73 | 57.0 | 4.02e-01 | 82.2% | 29.4% |
| 5000735 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 55.0 | 4.57e-01 | 77.6% | 49.7% |
| 5082704 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.73 | 59.0 | 4.75e-01 | 85.0% | 88.7% |
| 3655782 | 101.1.2.598 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, POLR3C_WHD | 0.73 | 57.0 | 4.02e-01 | 82.2% | 99.0% |
| 5050129 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.72 | 55.0 | 5.54e-01 | 80.4% | 89.1% |
| 4354474 | 101.1.2.598 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, POLR3C_WHD | 0.72 | 58.0 | 3.72e-01 | 84.1% | 35.5% |
| 4164723 | 101.1.2.598 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, POLR3C_WHD | 0.72 | 56.0 | 3.63e-01 | 81.3% | 36.0% |
| 3930816 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.72 | 59.0 | 4.26e-01 | 86.0% | 97.8% |
| 5080684 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.72 | 55.0 | 4.80e-01 | 80.4% | 54.8% |
| 4135068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 60.0 | 3.94e-01 | 88.8% | 46.5% |
| 5046134 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 56.0 | 5.06e-01 | 83.2% | 62.1% |
| 4012739 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 58.0 | 5.27e-01 | 84.1% | 92.6% |
| 5027451 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.71 | 55.0 | 5.63e-01 | 83.2% | 91.4% |
| 3394822 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.71 | 58.0 | 4.61e-01 | 84.1% | 91.3% |
| 3262460 | 101.1.2.661 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9, POLR3C_WHD | 0.71 | 57.0 | 3.82e-01 | 83.2% | 99.2% |
| 3306699 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.71 | 57.0 | 3.82e-01 | 84.1% | 99.0% |
| 3223457 | 101.1.2.661 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9, POLR3C_WHD | 0.71 | 58.0 | 4.17e-01 | 85.0% | 67.1% |
| 3187460 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.71 | 57.0 | 4.67e-01 | 84.1% | 94.6% |
| 3493458 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.71 | 57.0 | 5.07e-01 | 85.0% | 94.7% |
| 4945595 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 53.0 | 5.23e-01 | 87.9% | 73.0% |
| 3485716 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.71 | 58.0 | 4.66e-01 | 85.0% | 95.3% |
| 3586609 | 101.1.2.278 ↗ | alpha arrays › HTH › HTH › winged helix domain › CNDH2_C | 0.70 | 49.0 | 4.79e-01 | 72.0% | 64.7% |
| 3488429 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.70 | 57.0 | 4.64e-01 | 84.1% | 95.1% |
| 3724779 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.70 | 56.0 | 4.77e-01 | 84.1% | 94.7% |
| 1879340 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.70 | 54.0 | 5.77e-01 | 80.4% | 92.6% |
| 3194355 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.70 | 59.0 | 3.65e-01 | 88.8% | 35.7% |
| 4001659 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.70 | 56.0 | 4.73e-01 | 85.0% | 94.3% |
| 5067132 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 56.0 | 5.52e-01 | 86.0% | 100.0% |
| 3602673 | 2004.1.1.1085 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF30184 | 0.70 | 56.0 | 5.57e-01 | 85.0% | 93.6% |
| 5069541 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.70 | 55.0 | 5.64e-01 | 85.0% | 98.1% |
| 3630104 | 192.24.1.6 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.70 | 56.0 | 3.79e-01 | 85.0% | 49.5% |
| 4669204 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 61.0 | 3.95e-01 | 92.5% | 47.8% |
| 3689581 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.69 | 60.0 | 3.72e-01 | 91.6% | 35.8% |
| 2609 | 101.1.2.38 ↗ | alpha arrays › HTH › HTH › winged helix domain › RTP | 0.69 | 51.0 | 4.97e-01 | 78.5% | 79.2% |
| 4443506 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.69 | 57.0 | 3.80e-01 | 88.8% | 50.2% |
| 4585912 | 101.1.2.603 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9 | 0.69 | 62.0 | 4.14e-01 | 96.3% | 74.9% |
| 3407104 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 48.0 | 5.35e-01 | 74.8% | 95.3% |
| 3223233 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.66 | 62.0 | 4.72e-01 | 100.0% | 83.9% |
| 3743779 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.66 | 60.0 | 5.24e-01 | 97.2% | 94.8% |
| 3640260 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.66 | 61.0 | 4.86e-01 | 100.0% | 95.6% |
| 3783244 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.66 | 61.0 | 4.72e-01 | 100.0% | 85.8% |
| 3692895 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.65 | 60.0 | 4.59e-01 | 100.0% | 86.1% |
| 4940432 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 48.0 | 5.19e-01 | 88.8% | 98.9% |
D2
high
residues 133-280
Domain cluster:
rep: IMGVR_UViG_3300000193_000135-3300000193-SI47jul10_135mDRAFT_10031922__D19-143
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13814.13 best | Replic_Relax | 35.6 | 1.40e-08 | 64.9% | 46.2% |
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p1zA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 50.0 | 5.37e-01 | 100.0% | 82.7% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.71 | 41.0 | 5.02e-01 | 96.6% | 91.2% |
| 1dz3A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 46.0 | 4.96e-01 | 92.6% | 79.7% |
| 2fokA03 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.68 | 63.0 | 5.98e-01 | 100.0% | 85.1% |
| 2inbA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.68 | 56.0 | 5.93e-01 | 96.6% | 100.0% |
| 3geeA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 51.0 | 5.35e-01 | 99.3% | 86.5% |
| 2ewfA03 | 3.40.91.50 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.68 | 63.0 | 5.43e-01 | 100.0% | 82.2% |
| 2zayA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 48.0 | 5.24e-01 | 99.3% | 88.6% |
| 3lucA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 49.0 | 5.19e-01 | 100.0% | 86.7% |
| 3bamA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.66 | 52.0 | 4.65e-01 | 92.6% | 59.7% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 48.0 | 5.02e-01 | 98.6% | 85.9% |
| 2m9mA00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 46.0 | 4.76e-01 | 98.0% | 80.6% |
| 4uy9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 32.0 | 3.93e-01 | 83.1% | 78.9% |
| 2o2gA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 46.0 | 4.11e-01 | 84.5% | 96.8% |
| 3flhB00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.58 | 37.0 | 4.02e-01 | 85.8% | 76.0% |
| 3eurA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 39.0 | 4.04e-01 | 91.9% | 71.4% |
| 3erwF00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 37.0 | 3.89e-01 | 85.1% | 71.0% |
| 3icsA03 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.56 | 33.0 | 3.95e-01 | 87.8% | 85.3% |
| 1wduB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.56 | 50.0 | 4.41e-01 | 98.0% | 95.4% |
| 3nhvC01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.56 | 35.0 | 3.85e-01 | 87.8% | 76.7% |
| 4qysA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 34.0 | 3.93e-01 | 77.7% | 85.6% |
| 3pt3B00 | 3.30.2410.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic fold › Hect, E3 ligase catalytic domain | 0.55 | 31.0 | 3.71e-01 | 99.3% | 83.5% |
| 1akoA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 49.0 | 4.05e-01 | 100.0% | 86.9% |
| 4uulA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 45.0 | 4.53e-01 | 89.9% | 94.1% |
| 4fvaC00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 49.0 | 4.13e-01 | 100.0% | 93.2% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.54 | 39.0 | 3.52e-01 | 87.2% | 53.4% |
| 1vybA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 49.0 | 4.21e-01 | 100.0% | 94.5% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.53 | 44.0 | 3.22e-01 | 87.2% | 83.8% |
| 2im5A00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.53 | 44.0 | 3.20e-01 | 87.2% | 82.8% |
| 1t8sA02 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.53 | 46.0 | 3.70e-01 | 96.6% | 81.5% |
| 1kngA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 35.0 | 3.55e-01 | 89.9% | 68.1% |
| 4hlnA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 45.0 | 4.02e-01 | 100.0% | 65.9% |
| 7otsB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 45.0 | 3.67e-01 | 97.3% | 99.3% |
| 2wj6A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 46.0 | 4.13e-01 | 99.3% | 81.4% |
| 2ocgA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 44.0 | 3.77e-01 | 99.3% | 87.0% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5076295 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.76 | 64.0 | 6.69e-01 | 99.3% | 97.8% |
| 5018195 | 2008.1.1.87 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YhcG_C | 0.76 | 61.0 | 6.24e-01 | 97.3% | 86.9% |
| 4934034 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 55.0 | 4.41e-01 | 93.9% | 40.0% |
| 3838596 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.74 | 64.0 | 5.69e-01 | 98.0% | 66.3% |
| 4984635 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.73 | 56.0 | 6.22e-01 | 93.2% | 100.0% |
| 5042516 | 2008.1.1.235 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26618 | 0.73 | 56.0 | 6.07e-01 | 93.9% | 95.2% |
| 4937744 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.73 | 57.0 | 6.24e-01 | 98.0% | 100.0% |
| 5004622 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.73 | 54.0 | 5.86e-01 | 97.3% | 91.2% |
| 4949772 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 48.0 | 5.57e-01 | 92.6% | 96.2% |
| 4944782 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 60.0 | 5.97e-01 | 98.6% | 87.3% |
| 4965617 | 2008.1.1.219 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 | 0.71 | 55.0 | 5.85e-01 | 100.0% | 92.3% |
| 4950204 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 63.0 | 6.17e-01 | 95.3% | 93.8% |
| 5004464 | 2008.1.1.78 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc | 0.70 | 48.0 | 5.23e-01 | 96.6% | 83.2% |
| 4948814 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 59.0 | 5.73e-01 | 95.3% | 82.5% |
| 11040 | 2008.1.1.32 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › XisH | 0.69 | 57.0 | 6.02e-01 | 97.3% | 100.0% |
| 141372 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.68 | 41.0 | 5.04e-01 | 86.5% | 95.6% |
| 5065022 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.68 | 56.0 | 4.92e-01 | 98.0% | 60.0% |
| 1721531 | 2008.1.1.45 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_AlwI | 0.68 | 64.0 | 5.44e-01 | 100.0% | 81.9% |
| 4669225 | 2008.1.1.104 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cap4_nuclease | 0.67 | 54.0 | 5.31e-01 | 91.9% | 78.1% |
| 4950447 | 2008.1.1.87 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YhcG_C | 0.67 | 56.0 | 5.59e-01 | 93.9% | 85.7% |
| 3423985 | 7590.1.1.3 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid | 0.67 | 52.0 | 4.80e-01 | 100.0% | 64.2% |
| 3576102 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.66 | 47.0 | 4.64e-01 | 100.0% | 68.1% |
| 4950766 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 60.0 | 5.31e-01 | 100.0% | 80.9% |
| 5044086 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 60.0 | 5.89e-01 | 100.0% | 98.1% |
| 3616325 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.65 | 48.0 | 4.68e-01 | 100.0% | 70.0% |
| 3736568 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 54.0 | 5.39e-01 | 100.0% | 85.8% |
| 3586624 | 7590.1.1.6 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid | 0.65 | 48.0 | 4.66e-01 | 99.3% | 69.1% |
| 4198066 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.65 | 48.0 | 4.70e-01 | 99.3% | 71.2% |
| 5042023 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.64 | 47.0 | 4.31e-01 | 87.2% | 57.9% |
| 4984685 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 56.0 | 5.52e-01 | 96.6% | 100.0% |
| 1117756 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.62 | 50.0 | 4.59e-01 | 100.0% | 65.8% |
| 3235584 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.61 | 47.0 | 4.57e-01 | 100.0% | 72.7% |
| 5082181 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 53.0 | 5.23e-01 | 93.9% | 96.1% |
| 3211115 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.60 | 55.0 | 4.84e-01 | 100.0% | 70.0% |
| 3936292 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.60 | 47.0 | 4.52e-01 | 100.0% | 73.9% |
| 3182836 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 54.0 | 5.20e-01 | 100.0% | 89.4% |
| 3925518 | 7590.1.1.9 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › PF29016 | 0.59 | 46.0 | 4.65e-01 | 100.0% | 82.8% |
| 4084414 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.59 | 51.0 | 5.24e-01 | 96.6% | 96.4% |
| 162910 | 7579.1.1.13 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH | 0.58 | 46.0 | 4.11e-01 | 84.5% | 96.8% |
| 2455723 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.58 | 33.0 | 3.50e-01 | 73.0% | 62.2% |
| 3276368 | 2004.1.1.598 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 | 0.57 | 52.0 | 4.92e-01 | 98.6% | 87.4% |
| 4009644 | 2008.1.1.160 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27151 | 0.57 | 50.0 | 4.75e-01 | 94.6% | 81.5% |
| 4939281 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.57 | 51.0 | 4.92e-01 | 97.3% | 87.6% |
| 5021943 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.56 | 46.0 | 3.90e-01 | 86.5% | 65.0% |
| 3948974 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.56 | 35.0 | 3.88e-01 | 87.8% | 76.7% |
| 4474036 | 2008.1.1.40 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Endonuc-MspI | 0.56 | 47.0 | 4.05e-01 | 91.2% | 97.9% |
| 4626907 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 46.0 | 3.81e-01 | 89.2% | 64.9% |
| 4969306 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 45.0 | 3.71e-01 | 87.8% | 59.6% |
| 3962732 | 2496.1.1.4 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › SpoIIAA-like | 0.53 | 41.0 | 4.44e-01 | 100.0% | 100.0% |
| 3753580 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.53 | 48.0 | 4.11e-01 | 100.0% | 93.3% |
| 3634459 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.53 | 38.0 | 4.23e-01 | 84.5% | 99.1% |
| 4519331 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.53 | 48.0 | 3.55e-01 | 100.0% | 62.9% |
| 3363393 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.53 | 46.0 | 4.05e-01 | 96.6% | 78.2% |
| 3705026 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.52 | 40.0 | 4.14e-01 | 83.8% | 85.0% |
| 3741831 | 247.1.1.13 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_4 | 0.52 | 46.0 | 3.48e-01 | 95.3% | 92.0% |
| 4883400 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.51 | 44.0 | 4.02e-01 | 98.6% | 94.3% |
| 2629991 | 2496.1.1.3 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › SiaC | 0.51 | 39.0 | 4.13e-01 | 93.2% | 93.7% |