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NC_025470.1__YP_009104042.1__S140_41__00041
Bact-VirNC_025470.1__YP_009104042.1__S140_41__00041
Identity
- Accession:
- NC_025470 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-40
Domain cluster:
representative
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hb9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.72 | 48.0 | 2.71e-01 | 100.0% | 7.2% |
| 4aqlA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.71 | 52.0 | 3.75e-01 | 87.2% | 37.4% |
| 3id6A01 | 3.30.420.220 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.71 | 57.0 | 4.24e-01 | 94.9% | 53.8% |
| 3nbxX04 | 2.40.128.430 | Mainly Beta › Beta Barrel › Lipocalin › | 0.70 | 45.0 | 3.29e-01 | 71.8% | 23.4% |
| 1x05A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.70 | 58.0 | 4.14e-01 | 100.0% | 36.4% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.70 | 55.0 | 5.11e-01 | 100.0% | 80.7% |
| 3t69A01 | 3.30.420.300 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain | 0.69 | 54.0 | 4.44e-01 | 87.2% | 72.0% |
| 1i3zA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.69 | 56.0 | 4.27e-01 | 100.0% | 58.3% |
| 4ecnA01 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.69 | 47.0 | 3.48e-01 | 71.8% | 80.6% |
| 2pe4A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 43.0 | 2.45e-01 | 100.0% | 6.0% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.68 | 55.0 | 4.20e-01 | 100.0% | 57.7% |
| 3ebrA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 46.0 | 3.05e-01 | 71.8% | 51.3% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.68 | 55.0 | 4.81e-01 | 100.0% | 66.7% |
| 2xzmR01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 50.0 | 2.95e-01 | 82.1% | 21.5% |
| 6vp6A03 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 49.0 | 2.92e-01 | 82.1% | 20.2% |
| 8hmcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 49.0 | 2.90e-01 | 82.1% | 21.5% |
| 2cqpA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 52.0 | 3.95e-01 | 89.7% | 71.4% |
| 2o1qA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 45.0 | 3.17e-01 | 71.8% | 66.1% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 54.0 | 4.01e-01 | 100.0% | 35.2% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 50.0 | 3.74e-01 | 84.6% | 55.6% |
| 4hqsA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.65 | 51.0 | 3.67e-01 | 94.9% | 83.7% |
| 4htlA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 51.0 | 3.97e-01 | 97.4% | 49.0% |
| 1j8bA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.64 | 44.0 | 3.28e-01 | 71.8% | 41.3% |
| 5j3tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 51.0 | 3.63e-01 | 100.0% | 28.6% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 51.0 | 3.03e-01 | 92.3% | 19.1% |
| 4wfsA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 54.0 | 3.33e-01 | 97.4% | 33.8% |
| 4hwtA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 48.0 | 3.74e-01 | 100.0% | 87.3% |
| 1z6nA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 47.0 | 3.32e-01 | 100.0% | 66.9% |
| 1evlA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 53.0 | 3.89e-01 | 100.0% | 83.0% |
| 1mkeA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 50.0 | 3.43e-01 | 100.0% | 25.0% |
| 4gp3A03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.62 | 46.0 | 3.37e-01 | 87.2% | 69.7% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 50.0 | 3.78e-01 | 100.0% | 35.5% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 3.74e-01 | 100.0% | 36.7% |
| 3c19A02 | 3.10.20.300 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain | 0.61 | 41.0 | 3.33e-01 | 71.8% | 60.3% |
| 3f42A00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.60 | 41.0 | 3.16e-01 | 71.8% | 39.8% |
| 2gupA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 51.0 | 3.94e-01 | 100.0% | 45.4% |
| 1zxuA00 | 2.40.160.200 | Mainly Beta › Beta Barrel › Porin › LURP1-related | 0.60 | 52.0 | 3.44e-01 | 97.4% | 69.8% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.60 | 50.0 | 3.47e-01 | 100.0% | 29.3% |
| 2itmA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 44.0 | 2.90e-01 | 97.4% | 26.1% |
| 8djfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 43.0 | 2.66e-01 | 82.1% | 25.9% |
| 3j7aF02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.60 | 43.0 | 4.11e-01 | 94.9% | 64.7% |
| 2vhjA02 | 2.30.270.20 | Mainly Beta › Roll › duf1285 protein fold › | 0.59 | 41.0 | 3.64e-01 | 76.9% | 77.4% |
| 6b4oA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 40.0 | 3.00e-01 | 97.4% | 24.6% |
| 4tkcA00 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.58 | 44.0 | 3.33e-01 | 94.9% | 73.7% |
| 1aogA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 42.0 | 3.04e-01 | 87.2% | 24.0% |
| 6jx5A01 | 3.30.2160.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.57 | 48.0 | 3.97e-01 | 100.0% | 81.3% |
| 1ybxA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.57 | 44.0 | 3.39e-01 | 100.0% | 37.4% |
| 2d1cA01 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.57 | 43.0 | 2.46e-01 | 84.6% | 20.3% |
| 1qr0A02 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.56 | 49.0 | 3.61e-01 | 100.0% | 38.8% |
| 3jyyA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 41.0 | 3.07e-01 | 94.9% | 70.1% |
| 4fk1A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 45.0 | 3.02e-01 | 100.0% | 90.9% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 37.0 | 2.90e-01 | 97.4% | 27.8% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.54 | 39.0 | 2.94e-01 | 97.4% | 30.7% |
| 5xuhA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.54 | 47.0 | 3.30e-01 | 100.0% | 33.6% |
| 1xhbA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 44.0 | 2.79e-01 | 100.0% | 46.1% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 37.0 | 3.79e-01 | 84.6% | 87.2% |
| 4bpnW02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.53 | 43.0 | 4.04e-01 | 100.0% | 88.2% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.53 | 40.0 | 3.59e-01 | 94.9% | 100.0% |
| 3pieA02 | 3.30.1370.250 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 42.0 | 3.29e-01 | 100.0% | 75.0% |
| 4uijA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.52 | 41.0 | 3.10e-01 | 92.3% | 51.0% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.51 | 39.0 | 2.89e-01 | 92.3% | 38.2% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4117409 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.88 | 78.0 | 4.30e-01 | 100.0% | 21.2% |
| 3976684 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.81 | 71.0 | 5.61e-01 | 100.0% | 48.8% |
| 4953660 | 3407.1.1.2 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc | 0.81 | 69.0 | 4.85e-01 | 97.4% | 47.5% |
| 4297945 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.80 | 68.0 | 6.18e-01 | 100.0% | 80.0% |
| 4566136 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.78 | 55.0 | 3.27e-01 | 87.2% | 10.0% |
| 4313160 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.77 | 59.0 | 3.34e-01 | 94.9% | 8.0% |
| None | — | 0.76 | 59.0 | 3.53e-01 | 94.9% | 12.5% | |
| 3429387 | 386.1.1.6 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 | 0.75 | 64.0 | 6.20e-01 | 100.0% | 91.1% |
| 4484607 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.74 | 56.0 | 3.18e-01 | 94.9% | 7.9% |
| 3897826 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.73 | 58.0 | 4.11e-01 | 87.2% | 49.6% |
| 4081720 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.72 | 51.0 | 2.98e-01 | 87.2% | 8.2% |
| 3618512 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.72 | 55.0 | 3.34e-01 | 84.6% | 23.2% |
| 5020026 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.72 | 48.0 | 3.68e-01 | 100.0% | 31.8% |
| 3412833 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.71 | 60.0 | 4.31e-01 | 100.0% | 36.7% |
| 3547186 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 58.0 | 4.06e-01 | 100.0% | 29.6% |
| 4670927 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.70 | 53.0 | 3.26e-01 | 94.9% | 13.8% |
| 3213147 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.70 | 55.0 | 4.13e-01 | 100.0% | 53.9% |
| 5014656 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.69 | 47.0 | 4.04e-01 | 71.8% | 49.2% |
| 4650838 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.68 | 51.0 | 2.93e-01 | 94.9% | 8.4% |
| 4927504 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.68 | 56.0 | 4.00e-01 | 97.4% | 43.2% |
| 3250206 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.68 | 55.0 | 4.67e-01 | 100.0% | 70.7% |
| 3714022 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.68 | 48.0 | 4.08e-01 | 74.4% | 48.3% |
| 4204479 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 53.0 | 3.21e-01 | 92.3% | 20.0% |
| 3513810 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 55.0 | 3.84e-01 | 100.0% | 28.1% |
| 3716107 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.67 | 51.0 | 4.63e-01 | 100.0% | 66.7% |
| 3397300 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 50.0 | 2.99e-01 | 84.6% | 18.4% |
| 3958672 | 2485.1.1.56 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rng_hyd_C | 0.67 | 54.0 | 4.59e-01 | 97.4% | 98.6% |
| 3566455 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.66 | 51.0 | 4.07e-01 | 100.0% | 94.0% |
| 3561937 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.66 | 57.0 | 3.51e-01 | 100.0% | 22.7% |
| 3269373 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 47.0 | 3.59e-01 | 76.9% | 43.3% |
| 3493556 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 53.0 | 3.92e-01 | 100.0% | 33.6% |
| 4053431 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.65 | 49.0 | 4.51e-01 | 87.2% | 90.9% |
| 3265019 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 52.0 | 3.96e-01 | 100.0% | 35.9% |
| 4047302 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.65 | 44.0 | 3.24e-01 | 71.8% | 38.0% |
| 3183857 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.65 | 53.0 | 3.98e-01 | 97.4% | 55.5% |
| 3417244 | 220.1.1.64 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII | 0.65 | 49.0 | 3.76e-01 | 84.6% | 52.6% |
| 4273935 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.65 | 47.0 | 4.42e-01 | 76.9% | 78.0% |
| 3939128 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 52.0 | 3.85e-01 | 100.0% | 33.6% |
| 3396736 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.64 | 51.0 | 4.55e-01 | 97.4% | 78.5% |
| 4139864 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.64 | 43.0 | 3.20e-01 | 71.8% | 39.8% |
| 3247727 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 51.0 | 3.59e-01 | 100.0% | 26.4% |
| 3207941 | 387.6.1.0 ↗ | few secondary structure elements › omega toxin-like | 0.64 | 49.0 | 3.71e-01 | 84.6% | 69.6% |
| 3399725 | 220.1.1.50 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 | 0.63 | 55.0 | 3.94e-01 | 100.0% | 39.1% |
| 4179161 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.63 | 53.0 | 4.43e-01 | 100.0% | 97.3% |
| 4197141 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.63 | 43.0 | 3.14e-01 | 71.8% | 38.0% |
| 4169299 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 51.0 | 3.84e-01 | 97.4% | 47.7% |
| 4965851 | 4100.1.1.9 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 | 0.62 | 53.0 | 4.78e-01 | 100.0% | 70.9% |
| 4152738 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.62 | 47.0 | 4.08e-01 | 97.4% | 100.0% |
| 4615793 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.62 | 43.0 | 3.35e-01 | 74.4% | 43.3% |
| 3700148 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.62 | 53.0 | 2.85e-01 | 100.0% | 11.0% |
| 3676220 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.62 | 45.0 | 3.19e-01 | 79.5% | 43.1% |
| 3401112 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.62 | 50.0 | 4.41e-01 | 87.2% | 81.7% |
| 4387556 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.61 | 46.0 | 3.56e-01 | 87.2% | 62.6% |
| 3709624 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 50.0 | 3.67e-01 | 94.9% | 40.0% |
| 4236240 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.60 | 41.0 | 3.12e-01 | 71.8% | 38.9% |
| 5051523 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 47.0 | 3.37e-01 | 87.2% | 30.0% |
| 3256547 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 46.0 | 3.66e-01 | 100.0% | 38.0% |
| 3615043 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 46.0 | 3.50e-01 | 89.7% | 36.4% |
| 4067487 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.59 | 47.0 | 3.51e-01 | 100.0% | 35.8% |
| 4312876 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.58 | 51.0 | 3.55e-01 | 100.0% | 70.0% |
| 5062937 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.58 | 46.0 | 3.31e-01 | 87.2% | 95.5% |
| 3405887 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.57 | 42.0 | 2.86e-01 | 94.9% | 38.5% |
| 3373537 | 109.4.1.1297 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 | 0.57 | 46.0 | 2.52e-01 | 89.7% | 23.9% |
| 3639685 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.57 | 47.0 | 3.62e-01 | 100.0% | 73.5% |
| 5059099 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.56 | 44.0 | 3.62e-01 | 100.0% | 43.2% |
| 3293955 | 2006.1.1.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase | 0.56 | 46.0 | 2.76e-01 | 100.0% | 81.0% |
| 4996190 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.56 | 47.0 | 3.34e-01 | 100.0% | 70.4% |
| 4545531 | 220.1.1.255 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_10 | 0.55 | 42.0 | 3.57e-01 | 97.4% | 48.8% |
| 3547409 | 604.1.1.153 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4455 | 0.55 | 44.0 | 2.81e-01 | 89.7% | 81.0% |
| 3560659 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 44.0 | 2.69e-01 | 100.0% | 34.7% |
| 4172704 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.54 | 39.0 | 3.63e-01 | 84.6% | 61.8% |
| 4983396 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.54 | 44.0 | 3.76e-01 | 100.0% | 78.6% |
| 4945974 | 7604.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydantoinase_A | 0.53 | 43.0 | 3.09e-01 | 97.4% | 39.2% |
| 3990001 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.52 | 35.0 | 3.39e-01 | 76.9% | 64.2% |
| 3726808 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.52 | 44.0 | 2.82e-01 | 94.9% | 56.1% |
| 3230113 | 4.1.1.315 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 | 0.51 | 45.0 | 2.59e-01 | 100.0% | 17.7% |
| 4096246 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.50 | 45.0 | 3.76e-01 | 100.0% | 93.8% |
| 3989311 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.50 | 42.0 | 3.00e-01 | 100.0% | 64.6% |