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NC_025470.1__YP_009104175.1__S140_177__00174
Bact-VirNC_025470.1__YP_009104175.1__S140_177__00174
Identity
- Accession:
- NC_025470 ↗
- Kingdom:
- phage
Quality
45.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-192
Domain cluster:
rep: MT857002.1__QOI58339.1__pSal_SNUABM02_106__00106__D420-557
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27114.1 best | Phage_tail_beta | 44.4 | 2.50e-11 | 48.0% | 80.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2491358 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.70 | 64.0 | 4.60e-01 | 94.4% | 47.7% |
| 2409669 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.68 | 60.0 | 4.61e-01 | 92.2% | 44.1% |
| 5040919 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 25.0 | 2.79e-01 | 73.2% | 52.1% |
| 3739780 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.51 | 42.0 | 3.07e-01 | 86.6% | 72.2% |
| 4237962 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.50 | 41.0 | 3.07e-01 | 86.6% | 68.9% |
D2
medium
residues 217-276_291-318
D3
medium
residues 319-513
D4
medium
residues 717-788