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NC_026590.1__YP_009124847.1__VC46_gp128__00104
Bact-VirNC_026590.1__YP_009124847.1__VC46_gp128__00104
Identity
- Accession:
- NC_026590 ↗
- Kingdom:
- phage
Quality
85.7
mean pLDDT
Taxonomy
TaxID: 1486472
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-105
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 36.0 | 3.26e-01 | 83.3% | 43.1% |
| 1dzkA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 46.0 | 4.02e-01 | 81.4% | 84.5% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 42.0 | 4.13e-01 | 80.4% | 68.8% |
| 4a6fA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 44.0 | 4.39e-01 | 80.4% | 81.0% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 28.0 | 3.39e-01 | 78.4% | 74.2% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 29.0 | 3.51e-01 | 81.4% | 77.3% |
| 1kz7C02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 42.0 | 3.84e-01 | 82.4% | 67.9% |
| 6kxkG01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 43.0 | 3.92e-01 | 84.3% | 99.2% |
| 4qq1C03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 41.0 | 4.41e-01 | 84.3% | 93.2% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 45.0 | 3.70e-01 | 90.2% | 80.2% |
| 1u9tA02 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 36.0 | 3.03e-01 | 82.4% | 42.0% |
| 3ebkB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 44.0 | 3.87e-01 | 100.0% | 82.9% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.51 | 39.0 | 3.81e-01 | 82.4% | 80.5% |
| 3pr6A00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 41.0 | 3.75e-01 | 91.2% | 93.8% |
| 4k2xB02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 29.0 | 3.18e-01 | 99.0% | 69.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4565271 | 220.1.1.71 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Inp1 | 0.58 | 45.0 | 4.25e-01 | 82.4% | 75.2% |
| 3607227 | 4012.3.1.0 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 | 0.57 | 28.0 | 3.91e-01 | 77.5% | 98.0% |
| 3606204 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 43.0 | 3.95e-01 | 81.4% | 63.0% |
| 4547666 | 220.1.1.71 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Inp1 | 0.56 | 44.0 | 4.09e-01 | 82.4% | 78.4% |
| 3275950 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.56 | 45.0 | 3.77e-01 | 92.2% | 50.9% |
| 3992152 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.56 | 42.0 | 3.72e-01 | 80.4% | 68.0% |
| 3707284 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 43.0 | 4.06e-01 | 82.4% | 70.8% |
| 3701236 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 43.0 | 3.86e-01 | 84.3% | 69.3% |
| 5051142 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 43.0 | 3.87e-01 | 91.2% | 90.3% |
| 4976967 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 43.0 | 3.84e-01 | 93.1% | 94.0% |
| 4019152 | 5.1.3.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › TrAA12 | 0.52 | 44.0 | 2.91e-01 | 93.1% | 95.1% |
| 3938063 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.51 | 41.0 | 3.82e-01 | 90.2% | 98.6% |
| 4977402 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 42.0 | 3.77e-01 | 91.2% | 89.7% |
| 3741657 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.51 | 39.0 | 3.77e-01 | 81.4% | 80.0% |
| 3231336 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.51 | 41.0 | 3.81e-01 | 91.2% | 96.3% |
| 3783191 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.51 | 40.0 | 3.36e-01 | 91.2% | 99.0% |
| 3742732 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.50 | 40.0 | 3.68e-01 | 92.2% | 93.9% |
| 3595378 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 41.0 | 3.69e-01 | 91.2% | 75.3% |
| 4977778 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 38.0 | 3.71e-01 | 82.4% | 92.2% |