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NC_026590.1__YP_009124889.1__VC46_gp086__00146
Bact-VirNC_026590.1__YP_009124889.1__VC46_gp086__00146
Identity
- Accession:
- NC_026590 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Taxonomy
TaxID: 1486472
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-73
Domain cluster:
rep: MH153804.1__AWN03684.1__PBI_JACE_64__00064__D9-23_38-85
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ui8A01 | 2.60.40.3930 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 48.0 | 4.22e-01 | 100.0% | 56.9% |
| 2xtlA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.60 | 40.0 | 3.59e-01 | 100.0% | 49.5% |
| 2o95B00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.58 | 40.0 | 3.03e-01 | 71.4% | 60.8% |
| 2drvA00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.58 | 43.0 | 3.22e-01 | 81.4% | 93.2% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.56 | 50.0 | 4.76e-01 | 100.0% | 91.7% |
| 4ojdH03 | 2.60.40.3980 | Mainly Beta › Sandwich › Immunoglobulin-like › Cell-cell fusogen EFF/AFF, domain 3 | 0.56 | 43.0 | 3.77e-01 | 81.4% | 68.3% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.56 | 38.0 | 2.93e-01 | 70.0% | 94.0% |
| 1m0wA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 35.0 | 3.10e-01 | 100.0% | 40.7% |
| 5cw3C01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 38.0 | 3.06e-01 | 71.4% | 77.6% |
| 3k5iA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 39.0 | 2.84e-01 | 100.0% | 26.8% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 34.0 | 2.86e-01 | 100.0% | 33.3% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 45.0 | 4.61e-01 | 95.7% | 98.6% |
| 2ec1A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 44.0 | 3.89e-01 | 100.0% | 85.6% |
| 5dcaA08 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 42.0 | 3.59e-01 | 100.0% | 53.6% |
| 4hwxA00 | 3.30.350.10 | Alpha Beta › 2-Layer Sandwich › Subtilisin Inhibitor › Subtilisin inhibitor-like | 0.53 | 48.0 | 4.06e-01 | 100.0% | 68.4% |
| 2huhA01 | 2.60.40.1600 | Mainly Beta › Sandwich › Immunoglobulin-like › Smr-associated-like | 0.53 | 41.0 | 3.42e-01 | 88.6% | 85.3% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.53 | 34.0 | 3.67e-01 | 100.0% | 76.7% |
| 7kseA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 45.0 | 3.63e-01 | 100.0% | 88.4% |
| 2jqzA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 46.0 | 3.78e-01 | 100.0% | 94.7% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.52 | 36.0 | 3.77e-01 | 100.0% | 81.0% |
| 2a90A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 43.0 | 3.94e-01 | 100.0% | 81.6% |
| 6tr4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 33.0 | 2.76e-01 | 100.0% | 35.9% |
| 2avxA00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.50 | 35.0 | 2.75e-01 | 74.3% | 93.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3889511 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.80 | 52.0 | 4.86e-01 | 100.0% | 55.3% |
| 3579209 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.65 | 53.0 | 4.38e-01 | 100.0% | 50.8% |
| 5023641 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 41.0 | 4.32e-01 | 100.0% | 73.8% |
| 3218243 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.61 | 51.0 | 4.77e-01 | 98.6% | 74.1% |
| 3441987 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 52.0 | 4.66e-01 | 100.0% | 90.5% |
| 3384982 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 52.0 | 4.63e-01 | 100.0% | 89.5% |
| 5069601 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.58 | 43.0 | 3.64e-01 | 100.0% | 49.1% |
| 5052821 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 41.0 | 3.59e-01 | 100.0% | 49.5% |
| 3805000 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 49.0 | 3.48e-01 | 100.0% | 38.4% |
| 3279295 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 43.0 | 3.92e-01 | 100.0% | 60.0% |
| 4964337 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.58 | 38.0 | 4.20e-01 | 98.6% | 87.3% |
| 5012930 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 4.16e-01 | 82.9% | 88.2% |
| 3183475 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.58 | 49.0 | 3.80e-01 | 100.0% | 95.9% |
| 3226798 | 11.1.4.63 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF870 | 0.57 | 43.0 | 3.71e-01 | 100.0% | 50.9% |
| 3243597 | 10.32.1.277 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF870 | 0.57 | 42.0 | 3.96e-01 | 100.0% | 64.7% |
| 4968195 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 42.0 | 3.49e-01 | 100.0% | 44.8% |
| 3966409 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 3.48e-01 | 100.0% | 48.2% |
| 4950854 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.75e-01 | 100.0% | 58.9% |
| 3928662 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.56 | 46.0 | 3.31e-01 | 100.0% | 33.0% |
| 3971649 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 50.0 | 3.66e-01 | 98.6% | 40.0% |
| 3820626 | 11.1.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 | 0.56 | 46.0 | 3.68e-01 | 100.0% | 46.6% |
| 3979533 | 10.32.1.55 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glft2_N | 0.56 | 39.0 | 3.13e-01 | 100.0% | 37.1% |
| 3974019 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 50.0 | 3.71e-01 | 100.0% | 54.9% |
| 426959 | 11.1.1.132 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YscW | 0.55 | 39.0 | 3.35e-01 | 100.0% | 46.9% |
| 4122400 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.54 | 40.0 | 2.82e-01 | 100.0% | 23.3% |
| 1489105 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.53 | 44.0 | 4.04e-01 | 100.0% | 70.7% |
| 3888374 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.46e-01 | 91.4% | 66.9% |
| 4944314 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 47.0 | 3.90e-01 | 100.0% | 64.0% |
| 4962335 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.52 | 36.0 | 3.71e-01 | 98.6% | 76.9% |
| 3171618 | 11.1.1.644 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Pom152 | 0.52 | 39.0 | 3.41e-01 | 81.4% | 68.2% |
| 199962 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.52 | 36.0 | 3.77e-01 | 100.0% | 81.0% |
| 5014950 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 47.0 | 3.58e-01 | 100.0% | 52.3% |
| 4946109 | 4139.1.1.1 ↗ | a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 | 0.51 | 44.0 | 3.59e-01 | 100.0% | 51.2% |
| 3537190 | 2004.5.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › Njmu-R1 | 0.51 | 45.0 | 3.55e-01 | 98.6% | 64.8% |
| 3191862 | 10.32.1.252 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7371 | 0.51 | 40.0 | 2.93e-01 | 100.0% | 32.2% |
| 4121299 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.51 | 38.0 | 2.75e-01 | 100.0% | 24.2% |
| 3232016 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.51 | 44.0 | 3.46e-01 | 100.0% | 46.4% |
| 3700429 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.51 | 46.0 | 3.64e-01 | 100.0% | 60.0% |
| 3780458 | 223.2.1.51 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Njmu-R1 | 0.51 | 42.0 | 3.42e-01 | 95.7% | 65.7% |
| 3582195 | 12.3.1.18 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydr_116N | 0.50 | 44.0 | 3.02e-01 | 98.6% | 81.2% |
| 4654177 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.50 | 35.0 | 2.50e-01 | 100.0% | 21.2% |