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NC_026610.2__YP_009126584.1__VC55_gp26__00026
Bact-VirNC_026610.2__YP_009126584.1__VC55_gp26__00026
Identity
- Accession:
- NC_026610 ↗
- Kingdom:
- phage
Quality
73.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-48
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7arcC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.72 | 55.0 | 3.81e-01 | 97.6% | 25.9% |
| 2q3fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 42.0 | 2.75e-01 | 71.4% | 15.1% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 43.0 | 3.36e-01 | 73.8% | 68.1% |
| 1uyvA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.61 | 49.0 | 3.10e-01 | 100.0% | 23.3% |
| 7dluA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 3.50e-01 | 100.0% | 50.6% |
| 2fd6A01 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.51 | 32.0 | 3.35e-01 | 100.0% | 59.0% |
| 6njyA01 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 45.0 | 3.27e-01 | 100.0% | 64.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4429745 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.59 | 50.0 | 3.50e-01 | 100.0% | 59.3% |
| 4024357 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.58 | 43.0 | 2.78e-01 | 81.0% | 28.6% |
| 3194492 | 109.4.1.1297 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 | 0.58 | 45.0 | 2.47e-01 | 85.7% | 5.2% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.54 | 42.0 | 3.42e-01 | 83.3% | 72.0% |
| 3340649 | 3926.1.1.0 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D | 0.52 | 41.0 | 2.83e-01 | 88.1% | 53.3% |
| 3957699 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 39.0 | 3.37e-01 | 100.0% | 48.8% |
| 3171414 | 274.1.1.54 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › PF29911 | 0.50 | 44.0 | 3.20e-01 | 100.0% | 37.3% |
D2
high
residues 124-173
Domain cluster:
rep: OP331229.1__UZT28625.1__pD_gene0018__00017__D59-108