←Back to structures

NC_027299.1__YP_009146209.1__SUFP_035__00035

Bact-Vir

NC_027299.1__YP_009146209.1__SUFP_035__00035

Identity

Accession:
NC_027299 ↗
Kingdom:
phage

Quality

78.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sulfitobacter_phage_NYA-2014a

TaxID: 1526550

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-104
PDB
Domain cluster: rep: OP596612.1__WAX24288.1__X__00035__D27-138
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2z30B00 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.80 46.0 5.64e-01 100.0% 90.8%
2b9dA01 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.68 26.0 3.96e-01 92.2% 89.7%
2ougA00 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.66 52.0 4.75e-01 100.0% 62.4%
1j2vA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 46.0 4.66e-01 100.0% 82.2%
1nz8A00 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.55 50.0 4.76e-01 100.0% 84.9%
1r6yA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 45.0 4.60e-01 100.0% 92.2%
4dzdA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.52 46.0 4.38e-01 100.0% 95.9%
4ewtA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 45.0 4.37e-01 100.0% 100.0%
6tmfM00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.50 45.0 4.53e-01 100.0% 98.0%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947646 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.81 65.0 6.33e-01 100.0% 78.2%
4487943 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.73 63.0 5.80e-01 100.0% 72.3%
4072538 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.70 61.0 5.77e-01 100.0% 79.2%
3165343 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.68 60.0 5.57e-01 100.0% 76.8%
3077668 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.68 55.0 5.41e-01 100.0% 81.7%
4637248 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.68 57.0 5.41e-01 100.0% 77.5%
4680481 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.64 60.0 5.50e-01 100.0% 80.8%
4226062 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.63 57.0 5.51e-01 100.0% 87.0%
4319385 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.60 54.0 5.04e-01 100.0% 78.4%
4062716 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.59 53.0 5.08e-01 100.0% 84.2%
4989899 304.139.1.2 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs 0.54 48.0 3.52e-01 100.0% 88.8%
4929832 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.52 44.0 4.40e-01 100.0% 89.4%
3470394 3382.1.1.1 ↗ alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.51 38.0 2.74e-01 80.6% 49.4%
D2 high residues 153-205
PDB