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NC_027335.2__YP_009147203.1__X__00199
Bact-VirNC_027335.2__YP_009147203.1__X__00199
Identity
- Accession:
- NC_027335 ↗
- Kingdom:
- phage
Quality
88.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Kochikohdavirus›
Enterococcus_phage_ECP3
TaxID: 1498168
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-58
Domain cluster:
rep: OX463805.1__CAI9187641.1__X__00123__D5-58
D2
high
residues 66-135
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2q83A02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.64 | 43.0 | 3.05e-01 | 71.4% | 69.1% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 41.0 | 3.81e-01 | 71.4% | 78.3% |
| 1on2A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.55 | 38.0 | 4.01e-01 | 77.1% | 81.0% |
| 2b3yA01 | 3.30.499.10 | Alpha Beta › 2-Layer Sandwich › Aconitase; domain 3 › Aconitase, domain 3 | 0.55 | 47.0 | 3.32e-01 | 100.0% | 78.2% |
| 2xheA03 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.53 | 38.0 | 3.26e-01 | 97.1% | 44.6% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.52 | 36.0 | 3.47e-01 | 74.3% | 87.1% |
| 2y44A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.50 | 43.0 | 3.26e-01 | 100.0% | 37.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960350 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.63 | 49.0 | 3.80e-01 | 84.3% | 41.3% |
| 3721853 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.62 | 44.0 | 4.43e-01 | 98.6% | 75.7% |
| 1487360 | 3929.1.1.1 ↗ | alpha bundles › THO1 C-terminal domain › THO1 C-terminal domain › THO1 C-terminal domain › Tho1_MOS11_C | 0.60 | 46.0 | 4.71e-01 | 100.0% | 85.1% |
| 3246096 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.59 | 46.0 | 2.94e-01 | 88.6% | 76.1% |
| 5079853 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.51 | 45.0 | 3.67e-01 | 98.6% | 99.2% |