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NC_027341.1__YP_009147753.1__ACQ37_gp096__00096
Bact-VirNC_027341.1__YP_009147753.1__ACQ37_gp096__00096
Identity
- Accession:
- NC_027341 ↗
- Kingdom:
- phage
Quality
74.3
mean pLDDT
Taxonomy
TaxID: 1560313
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-114
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2liyA00 | 2.20.25.390 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Stomagen | 0.60 | 29.0 | 3.85e-01 | 79.8% | 100.0% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.59 | 33.0 | 3.43e-01 | 97.1% | 56.4% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 32.0 | 3.23e-01 | 96.2% | 53.4% |
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 28.0 | 3.16e-01 | 97.1% | 61.3% |
| 3sfvB01 | 3.30.450.390 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 39.0 | 3.58e-01 | 100.0% | 54.2% |
| 4fvmA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 32.0 | 3.24e-01 | 98.1% | 56.3% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.53 | 45.0 | 3.13e-01 | 92.3% | 96.9% |
| 6fndA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 32.0 | 2.63e-01 | 87.5% | 33.3% |
| 2ljwA00 | 3.30.428.40 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Protein of unknown function DUF3067 | 0.52 | 36.0 | 3.67e-01 | 91.3% | 71.2% |
| 1omsA00 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.52 | 42.0 | 4.13e-01 | 99.0% | 79.8% |
| 2hh2A00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 28.0 | 3.18e-01 | 100.0% | 67.1% |
| 2raaA00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.52 | 38.0 | 3.21e-01 | 76.9% | 88.8% |
| 1yx3A01 | 3.30.1420.10 | Alpha Beta › 2-Layer Sandwich › Dissimilatory Siroheme-sulfite Reductase; Chain: A; domain 1 › DsrC protein, N-terminal domain | 0.52 | 20.0 | 3.05e-01 | 80.8% | 90.2% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.51 | 36.0 | 3.11e-01 | 75.0% | 85.9% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 35.0 | 3.29e-01 | 70.2% | 84.3% |
| 3b8mC01 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.51 | 39.0 | 3.41e-01 | 79.8% | 70.2% |
| 2ychA02 | 3.30.1490.300 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.51 | 29.0 | 3.51e-01 | 100.0% | 95.0% |
| 1knvB00 | 3.40.91.10 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.50 | 43.0 | 3.09e-01 | 92.3% | 49.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3344193 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.58 | 50.0 | 3.76e-01 | 97.1% | 89.3% |
| 4011420 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.56 | 51.0 | 3.79e-01 | 100.0% | 89.8% |
| 3214818 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.55 | 38.0 | 2.63e-01 | 71.2% | 22.9% |
| 4539710 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.54 | 44.0 | 4.28e-01 | 98.1% | 79.1% |
| 3506749 | 633.21.1.23 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 | 0.53 | 40.0 | 3.40e-01 | 77.9% | 75.2% |
| 4489725 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.53 | 45.0 | 4.41e-01 | 100.0% | 83.5% |
| 4618205 | 604.1.1.150 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954 | 0.53 | 40.0 | 3.84e-01 | 78.8% | 84.2% |
| 4859805 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.52 | 37.0 | 3.24e-01 | 74.0% | 68.8% |
| 3176989 | 601.19.1.40 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › PF28954 | 0.52 | 39.0 | 3.39e-01 | 78.8% | 69.4% |
| 4945978 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.51 | 36.0 | 3.11e-01 | 75.0% | 91.1% |
| 3214822 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.51 | 43.0 | 3.13e-01 | 94.2% | 82.6% |
| 3169451 | 109.4.1.3193 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, Suf, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 0.50 | 36.0 | 2.24e-01 | 76.0% | 16.7% |
| 3089543 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.50 | 37.0 | 2.98e-01 | 77.9% | 91.5% |