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NC_027342.1__YP_009147844.1__ACQ55_gp09__00009

Bact-Vir

NC_027342.1__YP_009147844.1__ACQ55_gp09__00009

Identity

Accession:
NC_027342 ↗
Kingdom:
phage

Quality

90.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Novosibovirus› Proteus_phage_PM16

TaxID: 1357704

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-109
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p1mB01 3.30.160.880 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain 0.62 26.0 3.79e-01 89.3% 88.9%
4mbsA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.56 39.0 2.76e-01 71.8% 87.0%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 4.29e-01 82.5% 90.3%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.97e-01 100.0% 76.0%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.54 41.0 3.12e-01 84.5% 65.2%
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 38.0 3.16e-01 91.3% 40.4%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.94e-01 76.7% 91.7%
1mhyD00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.52 46.0 2.98e-01 100.0% 81.8%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.87e-01 82.5% 85.1%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.46e-01 83.5% 57.4%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.42e-01 83.5% 56.8%
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.51 35.0 2.56e-01 71.8% 87.5%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 38.0 3.80e-01 83.5% 79.5%
5a4aA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.50 42.0 3.43e-01 94.2% 90.4%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4955301 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.57 47.0 3.46e-01 91.3% 63.9%
5044327 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 4.07e-01 72.8% 82.0%
4978424 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.56 42.0 4.04e-01 80.6% 77.5%
3585533 320.4.1.3 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB 0.55 46.0 4.09e-01 93.2% 62.7%
3602557 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.55 39.0 4.12e-01 74.8% 93.3%
3944118 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 38.0 4.07e-01 73.8% 90.0%
5054122 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 40.0 3.50e-01 93.2% 50.0%
4947503 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 42.0 3.73e-01 85.4% 84.4%
4983310 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.54 41.0 4.15e-01 86.4% 84.0%
5025451 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.54 39.0 3.90e-01 77.7% 79.1%
4944051 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 3.43e-01 80.6% 53.5%
5001284 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 40.0 3.52e-01 82.5% 58.7%
4878879 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 39.0 3.93e-01 79.6% 91.4%
2409292 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 40.0 4.08e-01 82.5% 87.5%
4928190 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.53 39.0 4.18e-01 77.7% 98.8%
5077919 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.52 39.0 3.98e-01 80.6% 86.0%
4950221 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.52 38.0 3.84e-01 79.6% 80.6%
4467663 601.51.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N,Flagellin_C 0.52 42.0 3.14e-01 90.3% 46.1%
4939797 2007.13.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit › CobN-Mg_chel 0.52 41.0 3.30e-01 86.4% 97.6%
5041315 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 39.0 3.99e-01 82.5% 94.0%
4953964 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 38.0 3.79e-01 79.6% 87.3%
1314126 857.1.1.1 ↗ a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.51 33.0 3.29e-01 89.3% 61.7%
4991742 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 38.0 3.60e-01 80.6% 69.2%
5031473 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 38.0 3.81e-01 79.6% 85.7%
4940345 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 39.0 3.61e-01 82.5% 69.6%
5071269 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 38.0 3.05e-01 79.6% 44.8%
3666051 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.50 29.0 3.28e-01 84.5% 73.8%
4996670 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 38.0 4.06e-01 83.5% 100.0%