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NC_027351.1__YP_009148798.1__ACQ19_gp002__00002

Bact-Vir

NC_027351.1__YP_009148798.1__ACQ19_gp002__00002

Identity

Accession:
NC_027351 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-83
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 36.0 5.60e-09 52.4% 80.4%
D2 high residues 89-152
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pptA01 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.57 31.0 3.81e-01 82.8% 91.9%
2j9uB00 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.54 37.0 3.99e-01 89.1% 100.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3451619 102.1.1.117 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF1677 0.59 43.0 3.86e-01 79.7% 62.1%
3431630 103.5.1.8 alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF1677 0.59 42.0 4.11e-01 79.7% 82.7%
3438405 386.1.1.310 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF1677 0.58 42.0 4.21e-01 81.2% 81.2%
3450949 4207.1.2.63 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › DUF1677 0.57 41.0 3.68e-01 81.2% 57.0%