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NC_027351.1__YP_009148925.1__ACQ19_gp129__00129
Bact-VirNC_027351.1__YP_009148925.1__ACQ19_gp129__00129
Identity
- Accession:
- NC_027351 ↗
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Taxonomy
TaxID: 1204529
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5h8iI00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.71 | 65.0 | 4.06e-01 | 100.0% | 67.9% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 48.0 | 4.06e-01 | 75.9% | 77.6% |
| 1iruI00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.67 | 57.0 | 3.91e-01 | 100.0% | 39.1% |
| 6muwB00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.67 | 57.0 | 3.85e-01 | 100.0% | 38.9% |
| 1yarH00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.66 | 56.0 | 3.95e-01 | 100.0% | 41.4% |
| 6z46V01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.66 | 56.0 | 4.03e-01 | 100.0% | 44.0% |
| 3vpgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 52.0 | 3.95e-01 | 93.1% | 87.9% |
| 5c8gB00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.61 | 47.0 | 3.77e-01 | 84.5% | 80.3% |
| 1kvkA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.60 | 42.0 | 3.25e-01 | 75.9% | 94.6% |
| 4nspA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.56 | 45.0 | 3.09e-01 | 93.1% | 71.8% |
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.54 | 44.0 | 2.54e-01 | 91.4% | 47.9% |
| 1umqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 37.0 | 3.72e-01 | 72.4% | 73.3% |
| 3lmmA03 | 3.30.565.60 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › | 0.52 | 45.0 | 3.28e-01 | 100.0% | 81.3% |
| 6iheA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 3.39e-01 | 100.0% | 90.7% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 35.0 | 3.58e-01 | 72.4% | 100.0% |
| 7ahhC02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 40.0 | 3.47e-01 | 94.8% | 63.8% |
| 4bwxA03 | 1.10.287.3700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 34.0 | 3.16e-01 | 70.7% | 82.5% |
| 2m3aA00 | 1.10.10.1900 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like | 0.50 | 35.0 | 3.43e-01 | 77.6% | 83.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2028252 | 3986.2.1.1 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › Dmd | 0.82 | 71.0 | 6.84e-01 | 93.1% | 85.9% |
| 4943944 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.70 | 61.0 | 5.07e-01 | 100.0% | 76.2% |
| 5000833 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.69 | 62.0 | 5.05e-01 | 100.0% | 76.2% |
| 5037861 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.68 | 38.0 | 3.53e-01 | 100.0% | 42.7% |
| 3593840 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.62 | 52.0 | 3.81e-01 | 93.1% | 86.5% |
| 4929384 | 2006.1.5.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Arginase | 0.58 | 50.0 | 3.29e-01 | 100.0% | 50.0% |
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.56 | 47.0 | 3.70e-01 | 100.0% | 87.4% |
| 3272928 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 46.0 | 3.24e-01 | 98.3% | 49.5% |
| 4433757 | 3347.1.1.3 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531 | 0.54 | 38.0 | 2.26e-01 | 93.1% | 9.5% |
| 4169248 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.54 | 42.0 | 3.09e-01 | 96.6% | 51.5% |
| 4930398 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 36.0 | 3.51e-01 | 74.1% | 97.1% |
| 5069117 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.53 | 44.0 | 3.06e-01 | 100.0% | 40.6% |
| 3821519 | 387.1.5.19 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Defensin | 0.51 | 39.0 | 4.13e-01 | 86.2% | 100.0% |