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NC_027351.1__YP_009148996.1__ACQ19_gp200__00200
Bact-VirNC_027351.1__YP_009148996.1__ACQ19_gp200__00200
Identity
- Accession:
- NC_027351 ↗
- Kingdom:
- phage
Quality
93.5
mean pLDDT
Taxonomy
TaxID: 1204529
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-37
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2im9A02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.76 | 55.0 | 3.64e-01 | 100.0% | 19.0% |
| 4kbmB01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 51.0 | 4.42e-01 | 100.0% | 50.9% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 45.0 | 3.93e-01 | 100.0% | 40.4% |
| 1vq8300 | 3.10.450.80 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 57.0 | 4.26e-01 | 100.0% | 76.1% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 46.0 | 3.70e-01 | 100.0% | 34.2% |
| 4bs9A04 | 3.30.40.250 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.66 | 51.0 | 4.00e-01 | 100.0% | 83.3% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 53.0 | 4.16e-01 | 100.0% | 44.0% |
| 1r77A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 54.0 | 3.90e-01 | 100.0% | 39.4% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 50.0 | 3.93e-01 | 100.0% | 43.8% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 45.0 | 3.16e-01 | 100.0% | 23.2% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.61 | 49.0 | 4.25e-01 | 97.1% | 57.1% |
| 4mb7A02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 44.0 | 2.99e-01 | 94.1% | 20.4% |
| 2iecD00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.59 | 45.0 | 3.21e-01 | 97.1% | 26.5% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 42.0 | 3.44e-01 | 85.3% | 65.7% |
| 4l8nA03 | 3.30.160.670 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 41.0 | 2.64e-01 | 94.1% | 12.2% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 46.0 | 4.06e-01 | 100.0% | 59.3% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 45.0 | 4.18e-01 | 100.0% | 71.4% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 45.0 | 3.20e-01 | 100.0% | 27.0% |
| 2iz4A02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 39.0 | 3.80e-01 | 97.1% | 57.1% |
| 6iouA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 41.0 | 3.12e-01 | 97.1% | 33.0% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 41.0 | 3.82e-01 | 100.0% | 69.6% |
| 1p0zA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 42.0 | 2.94e-01 | 91.2% | 87.0% |
| 1ng2A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 45.0 | 4.29e-01 | 100.0% | 95.5% |
| 6rwcA02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 39.0 | 3.84e-01 | 97.1% | 59.0% |
| 2i52B00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.55 | 42.0 | 3.02e-01 | 97.1% | 26.7% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 44.0 | 3.76e-01 | 100.0% | 54.0% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 43.0 | 3.27e-01 | 100.0% | 35.0% |
| 2uvaG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 40.0 | 2.86e-01 | 97.1% | 22.8% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 43.0 | 2.92e-01 | 100.0% | 51.0% |
| 5os9A00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.55 | 44.0 | 3.16e-01 | 100.0% | 28.7% |
| 3s5wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 41.0 | 2.36e-01 | 97.1% | 7.6% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 41.0 | 3.33e-01 | 97.1% | 44.4% |
| 5aykA07 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 41.0 | 3.05e-01 | 100.0% | 65.2% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 44.0 | 3.53e-01 | 100.0% | 45.8% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 44.0 | 3.15e-01 | 100.0% | 49.5% |
| 6heiA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 38.0 | 2.27e-01 | 100.0% | 9.3% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.52 | 40.0 | 2.64e-01 | 100.0% | 16.5% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.52 | 41.0 | 3.78e-01 | 100.0% | 86.3% |
| 1inlC02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.52 | 35.0 | 3.16e-01 | 100.0% | 42.2% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 39.0 | 3.39e-01 | 100.0% | 53.2% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004280 | 4112.1.1.1 ↗ | beta duplicates or obligate multimers › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX | 0.71 | 58.0 | 4.52e-01 | 97.1% | 42.7% |
| 3226032 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.69 | 56.0 | 4.83e-01 | 97.1% | 58.5% |
| 4976092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 57.0 | 4.14e-01 | 100.0% | 35.6% |
| 4243248 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.67 | 59.0 | 3.46e-01 | 100.0% | 16.9% |
| 5051954 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 50.0 | 3.99e-01 | 100.0% | 38.7% |
| 3757490 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.64 | 51.0 | 3.87e-01 | 100.0% | 37.9% |
| 1489341 | 330.10.1.1 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO | 0.64 | 51.0 | 3.56e-01 | 100.0% | 56.0% |
| 1112010 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.64 | 53.0 | 4.16e-01 | 100.0% | 44.0% |
| 3790199 | 64.5.1.0 ↗ | beta meanders › WW domain-like › Connector region of RNA helicase HrpB › Connector region of RNA helicase HrpB | 0.64 | 52.0 | 4.46e-01 | 100.0% | 60.0% |
| 4051081 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.64 | 52.0 | 4.37e-01 | 100.0% | 53.3% |
| 3820157 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.64 | 51.0 | 3.27e-01 | 97.1% | 17.8% |
| 3507809 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.62 | 52.0 | 4.60e-01 | 100.0% | 64.2% |
| 3505867 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.61 | 50.0 | 4.05e-01 | 100.0% | 72.0% |
| 3485727 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 49.0 | 3.70e-01 | 100.0% | 35.8% |
| 3750522 | 4.1.1.218 ↗ | beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N | 0.61 | 51.0 | 3.64e-01 | 100.0% | 30.9% |
| 3669786 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 49.0 | 4.46e-01 | 100.0% | 80.0% |
| 4602887 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 50.0 | 4.01e-01 | 100.0% | 77.0% |
| None | — | 0.60 | 49.0 | 3.19e-01 | 100.0% | 20.0% | |
| 4993449 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.58 | 45.0 | 3.36e-01 | 100.0% | 38.1% |
| 3774525 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 46.0 | 2.99e-01 | 100.0% | 18.9% |
| 1557343 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.58 | 42.0 | 3.44e-01 | 85.3% | 65.7% |
| 3622389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 45.0 | 3.83e-01 | 100.0% | 52.3% |
| 3816553 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.56 | 45.0 | 3.99e-01 | 100.0% | 61.8% |
| 3274551 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 45.0 | 3.65e-01 | 100.0% | 45.3% |
| 3591633 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.55 | 41.0 | 3.01e-01 | 100.0% | 27.3% |
| 4020677 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 45.0 | 3.09e-01 | 100.0% | 48.1% |
| 5036630 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.55 | 42.0 | 2.86e-01 | 97.1% | 84.7% |
| 5041400 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 40.0 | 3.91e-01 | 94.1% | 86.7% |
| 2770657 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.55 | 40.0 | 3.98e-01 | 100.0% | 77.5% |
| 3551009 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.54 | 38.0 | 2.40e-01 | 73.5% | 17.7% |
| 3606476 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.54 | 41.0 | 3.74e-01 | 97.1% | 63.6% |
| 5045717 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.54 | 42.0 | 2.94e-01 | 100.0% | 23.8% |
| 3483489 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 44.0 | 3.53e-01 | 100.0% | 45.3% |
| 3653195 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 42.0 | 3.89e-01 | 100.0% | 90.0% |
| 3192856 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 42.0 | 2.35e-01 | 94.1% | 7.8% |
| 2411452 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.52 | 41.0 | 2.90e-01 | 100.0% | 30.4% |
| 3805766 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.52 | 41.0 | 3.71e-01 | 100.0% | 65.5% |
| 3649929 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.52 | 36.0 | 2.89e-01 | 82.4% | 77.6% |
| 3608890 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.51 | 36.0 | 2.35e-01 | 100.0% | 15.4% |
| 3733718 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.51 | 37.0 | 3.06e-01 | 100.0% | 37.6% |
| 3518948 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.51 | 41.0 | 3.21e-01 | 100.0% | 82.4% |
| 3882130 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 42.0 | 2.61e-01 | 100.0% | 16.5% |
| 5048750 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.50 | 40.0 | 2.56e-01 | 100.0% | 16.7% |
| 3170024 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.50 | 39.0 | 2.52e-01 | 97.1% | 19.5% |