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NC_027355.1__YP_009149688.1__BCP8-2_127__00127

Bact-Vir

NC_027355.1__YP_009149688.1__BCP8-2_127__00127

Identity

Accession:
NC_027355 ↗
Kingdom:
phage

Quality

59.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Caeruleovirus› Bacillus_phage_BCP8-2

TaxID: 1129192

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-65
PDB
Domain cluster: rep: MK448710.1__QBX16110.1__Javan233_0030__00030__D34-99
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.86 76.0 6.96e-01 94.8% 78.1%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.44e-01 87.9% 97.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 55.0 5.54e-01 81.0% 96.5%
2akkA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 63.0 5.78e-01 98.3% 95.9%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 5.16e-01 86.2% 97.2%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 50.0 5.27e-01 77.6% 96.1%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 51.0 3.22e-01 87.9% 25.8%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 45.0 4.67e-01 72.4% 100.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 47.0 4.57e-01 75.9% 96.9%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 46.0 4.57e-01 74.1% 93.3%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 46.0 4.63e-01 74.1% 100.0%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.65 53.0 4.87e-01 91.4% 93.4%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 46.0 4.36e-01 75.9% 83.8%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 43.0 4.39e-01 72.4% 100.0%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 49.0 4.53e-01 87.9% 98.7%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 5.04e-01 81.0% 96.0%
2im9A02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.63 53.0 4.01e-01 98.3% 81.6%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.62 46.0 4.86e-01 81.0% 100.0%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 46.0 2.97e-01 87.9% 22.7%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 43.0 4.64e-01 77.6% 100.0%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.60 45.0 3.93e-01 84.5% 67.4%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 47.0 4.51e-01 87.9% 92.8%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.25e-01 89.7% 83.7%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 43.0 4.54e-01 79.3% 100.0%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 39.0 3.99e-01 70.7% 84.5%
1yzbA01 3.90.70.40 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.58 44.0 3.63e-01 89.7% 56.5%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 49.0 3.19e-01 100.0% 29.8%
3gceA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.58 44.0 3.71e-01 84.5% 95.2%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.55 43.0 3.74e-01 93.1% 91.2%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.78e-01 100.0% 80.0%
1wkrA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 38.0 2.77e-01 74.1% 90.0%
4gp3A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 42.0 3.49e-01 94.8% 81.1%
3hlzA02 1.20.120.1090 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 43.0 3.48e-01 96.6% 86.8%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.52 44.0 3.94e-01 100.0% 91.0%
2fgtA02 3.10.450.310 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.65e-01 87.9% 97.6%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.50 36.0 2.99e-01 79.3% 48.7%
3oymA01 1.10.340.70 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.50 41.0 3.52e-01 91.4% 79.6%
2yrtA00 4.10.1130.20 Few Secondary Structures › Irregular › btk motif of tyrosine-protein kinase itk › 0.50 33.0 3.16e-01 70.7% 82.7%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3590122 4999.1.1.1 ↗ beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX 0.90 65.0 6.27e-01 75.9% 81.5%
4031064 4999.1.1.0 ↗ beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like 0.83 57.0 5.83e-01 70.7% 74.5%
3756676 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.73 57.0 4.66e-01 82.8% 70.0%
5023740 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.80e-01 81.0% 96.0%
3790978 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.34e-01 84.5% 92.9%
4938404 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.70e-01 94.8% 87.3%
3519410 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.71 46.0 5.30e-01 70.7% 97.4%
5056706 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 55.0 5.88e-01 93.1% 98.0%
3507338 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 57.0 5.71e-01 87.9% 91.7%
4945288 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 48.0 5.44e-01 72.4% 100.0%
4998329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.66e-01 98.3% 89.1%
3504385 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.69 46.0 5.22e-01 70.7% 97.5%
4982334 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 54.0 5.59e-01 94.8% 90.9%
4966534 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 53.0 5.65e-01 94.8% 98.0%
3554293 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 50.0 4.85e-01 77.6% 92.3%
5002449 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 54.0 5.58e-01 98.3% 90.9%
3245086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 4.78e-01 91.4% 73.7%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 54.0 5.50e-01 93.1% 90.9%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.76e-01 94.8% 96.4%
4024411 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 47.0 4.89e-01 75.9% 78.2%
4935681 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 54.0 5.60e-01 94.8% 94.5%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 4.65e-01 89.7% 61.1%
5000593 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.66 54.0 4.96e-01 89.7% 100.0%
4333277 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.65 57.0 4.89e-01 94.8% 78.9%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.65 56.0 5.21e-01 94.8% 80.8%
4168653 4.1.1.111 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.65 47.0 5.08e-01 77.6% 100.0%
3516364 391.1.1.7 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.65 42.0 4.65e-01 70.7% 97.5%
4079234 220.1.1.54 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_18 0.63 43.0 3.33e-01 74.1% 82.9%
3592540 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 54.0 5.35e-01 94.8% 93.3%
4515677 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.62 50.0 4.14e-01 94.8% 78.1%
3413140 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.62 46.0 3.29e-01 82.8% 27.4%
3453664 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.62 46.0 3.49e-01 81.0% 72.7%
4938828 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 5.23e-01 94.8% 91.7%
3809821 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.61 51.0 3.23e-01 98.3% 39.7%
3706087 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 5.10e-01 91.4% 91.7%
3832604 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.61 51.0 2.94e-01 98.3% 21.4%
3964033 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.60 43.0 4.54e-01 77.6% 100.0%
4481026 4.1.1.407 ↗ beta barrels › SH3 › SH3 › SH3 › PF29661 0.60 49.0 4.91e-01 94.8% 86.7%
4269256 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.59 51.0 5.05e-01 94.8% 93.3%
5022448 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.64e-01 94.8% 97.3%
3604590 247.1.1.17 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › ODP 0.58 43.0 2.90e-01 81.0% 25.5%
3282992 391.1.2.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.58 48.0 3.94e-01 93.1% 61.1%
5038074 314.1.1.6 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB 0.58 48.0 3.35e-01 98.3% 63.0%
3022623 101.1.11.3 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP 0.57 37.0 3.33e-01 93.1% 47.0%
3683031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 38.0 3.58e-01 74.1% 65.3%
4040812 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.55 44.0 3.80e-01 87.9% 98.9%
3607918 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 45.0 2.73e-01 100.0% 41.1%
3884178 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.54 42.0 3.97e-01 89.7% 86.7%
4589583 2008.1.1.191 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_HpaII 0.53 43.0 3.17e-01 94.8% 92.5%
4210311 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.51 42.0 3.48e-01 94.8% 69.4%
3584393 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.50 39.0 2.91e-01 98.3% 32.1%
D2 medium residues 74-158
PDB