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NC_027364.1__YP_009150350.1__ACQ29_gp036__00036

Bact-Vir

NC_027364.1__YP_009150350.1__ACQ29_gp036__00036

Identity

Accession:
NC_027364 ↗
Kingdom:
phage

Quality

75.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Asteriusvirus› Escherichia_phage_PBECO4

TaxID: 1273738

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-132
PDB
Domain cluster: rep: MK773491.1__QCW19105.1__7t3_0588__00570__D7-107
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.68 41.0 4.23e-01 89.8% 63.3%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.63 55.0 4.96e-01 92.9% 76.6%
7ob9B01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.62 47.0 4.11e-01 80.3% 91.7%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.62 43.0 3.79e-01 89.0% 48.6%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.61 43.0 4.13e-01 90.6% 62.3%
1a87A01 3.30.1120.60 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin 0.60 43.0 4.84e-01 96.1% 96.9%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.59 40.0 4.60e-01 91.3% 92.6%
8ew8A01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.59 47.0 3.82e-01 84.3% 87.1%
1txkA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 46.0 3.30e-01 86.6% 82.5%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.55 43.0 3.48e-01 82.7% 78.5%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.55 44.0 4.16e-01 85.8% 94.2%
4e2oA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 31.0 3.59e-01 76.4% 77.3%
2jkbA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 46.0 3.37e-01 93.7% 89.5%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.54 44.0 3.92e-01 85.8% 71.3%
1aq3A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.54 39.0 3.97e-01 74.8% 95.3%
1oh1A00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.54 39.0 4.14e-01 74.0% 93.6%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.54 40.0 3.69e-01 92.1% 60.1%
2xsgB01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 40.0 3.19e-01 80.3% 87.4%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.88e-01 83.5% 86.4%
3kl0D01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 41.0 4.49e-01 95.3% 100.0%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.74e-01 89.8% 97.1%
1h6lA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 45.0 3.30e-01 94.5% 83.0%
1nycA00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.52 41.0 4.32e-01 94.5% 95.5%
4gq1A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 3.20e-01 92.9% 86.5%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 39.0 3.62e-01 90.6% 63.4%
1m53A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 31.0 3.87e-01 78.0% 100.0%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 41.0 3.13e-01 89.8% 83.4%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5035423 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 42.0 4.99e-01 97.6% 89.4%
3812869 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.66 47.0 5.21e-01 73.2% 100.0%
3499681 292.2.1.1 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.65 43.0 4.93e-01 83.5% 91.4%
3909218 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.62 40.0 3.45e-01 88.2% 42.0%
3456597 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.60 52.0 4.77e-01 94.5% 80.4%
3232560 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.60 43.0 3.22e-01 73.2% 87.8%
3229481 71.1.1.21 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25897 0.59 45.0 3.73e-01 88.2% 46.5%
3932406 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.59 43.0 3.14e-01 74.8% 81.6%
3967227 9.3.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.58 44.0 3.87e-01 78.7% 75.6%
3596915 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 45.0 2.92e-01 81.9% 84.6%
1097232 3180.1.1.1 ↗ a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG 0.58 41.0 4.43e-01 96.1% 86.0%
3402706 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.57 49.0 4.55e-01 94.5% 89.1%
3418904 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.57 42.0 4.62e-01 75.6% 100.0%
3690474 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 51.0 4.22e-01 96.1% 78.0%
3534391 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 34.0 2.97e-01 85.0% 38.4%
3658748 4099.1.1.14 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Knl1_RWD_C 0.56 39.0 4.34e-01 82.7% 89.0%
3276063 210.1.4.1 ↗ a+b four layers › Ntn/PP2C › Ntn › (Glycosyl)asparaginase › Asparaginase_2 0.55 49.0 3.52e-01 100.0% 86.9%
3787121 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.55 41.0 4.15e-01 77.2% 99.2%
3947246 331.3.1.19 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C 0.55 50.0 4.31e-01 100.0% 82.5%
3242101 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.54 45.0 2.92e-01 89.8% 88.8%
3427945 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.54 41.0 4.50e-01 93.7% 100.0%
4241745 883.1.1.8 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Grp7_allergen 0.54 45.0 3.90e-01 87.4% 87.9%
867 9.6.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Staphostatin › Staphostatin › Staphostatin_A 0.54 39.0 4.14e-01 74.0% 93.6%
3062889 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.54 43.0 3.85e-01 84.3% 82.8%
3990176 883.1.1.22 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26547 0.54 42.0 3.60e-01 82.7% 81.5%
4006548 331.19.1.2 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N 0.54 34.0 3.82e-01 87.4% 83.2%
3850090 4099.1.1.19 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM8 0.53 35.0 3.41e-01 89.0% 59.4%
3760199 331.2.1.6 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › Med14_RM8 0.53 35.0 3.87e-01 88.2% 85.0%
3732704 5.1.4.80 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller 0.53 42.0 2.93e-01 85.0% 38.6%
3001014 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 41.0 3.84e-01 84.3% 86.8%
3972685 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 45.0 4.26e-01 96.9% 79.3%
3490231 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.51 41.0 2.98e-01 84.3% 58.0%
3541029 12.3.1.43 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › NCU-G1 0.51 42.0 3.14e-01 89.8% 96.7%