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NC_027364.1__YP_009150449.1__ACQ29_gp135__00135
Bact-VirNC_027364.1__YP_009150449.1__ACQ29_gp135__00135
Identity
- Accession:
- NC_027364 ↗
- Kingdom:
- phage
Quality
67.2
mean pLDDT
Taxonomy
TaxID: 1273738
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-21_57-85_130-158_216-245
D2
medium
residues 86-129_159-215
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3i9v700 | 3.30.920.80 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15 | 0.58 | 44.0 | 4.10e-01 | 89.1% | 63.8% |
| 2iiiA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.58 | 43.0 | 4.08e-01 | 100.0% | 65.8% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.57 | 43.0 | 4.14e-01 | 100.0% | 68.4% |
| 2xglA00 | 3.10.450.300 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein | 0.53 | 41.0 | 4.35e-01 | 83.2% | 96.7% |
| 1u7iA01 | 3.30.720.100 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.52 | 34.0 | 3.92e-01 | 89.1% | 100.0% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.52 | 33.0 | 3.32e-01 | 85.1% | 61.5% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 42.0 | 3.24e-01 | 86.1% | 84.1% |
| 2h2yA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.52 | 36.0 | 3.51e-01 | 89.1% | 62.9% |
| 7mhwA01 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 39.0 | 4.19e-01 | 84.2% | 89.9% |
| 3iwcB00 | 3.30.360.110 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › S-adenosylmethionine decarboxylase domain | 0.51 | 28.0 | 3.45e-01 | 90.1% | 86.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2162624 | 3894.1.1.1 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 | 0.71 | 36.0 | 3.33e-01 | 82.2% | 40.5% |
| 5017022 | 331.1.1.27 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CBS | 0.62 | 42.0 | 2.99e-01 | 100.0% | 24.2% |
| 5003069 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.60 | 42.0 | 3.48e-01 | 83.2% | 41.1% |
| 4940288 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.58 | 41.0 | 2.75e-01 | 73.3% | 73.1% |
| 3826773 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.57 | 35.0 | 3.69e-01 | 84.2% | 68.5% |
| 3289116 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.56 | 40.0 | 4.34e-01 | 94.1% | 93.8% |
| 4149965 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.53 | 47.0 | 3.31e-01 | 100.0% | 57.1% |
| 4031984 | 3894.1.1.1 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 | 0.52 | 41.0 | 3.77e-01 | 92.1% | 65.6% |
| 4774640 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.52 | 26.0 | 3.34e-01 | 92.1% | 83.1% |
| 4228401 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.52 | 47.0 | 3.69e-01 | 100.0% | 49.0% |
| 4200177 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.52 | 42.0 | 3.82e-01 | 92.1% | 66.2% |
| 3755387 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.51 | 46.0 | 3.30e-01 | 100.0% | 45.3% |
| 1318713 | 3894.1.1.2 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfA_EBD | 0.50 | 40.0 | 3.73e-01 | 92.1% | 67.5% |
| 3638115 | 3953.1.1.0 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain | 0.50 | 39.0 | 3.87e-01 | 84.2% | 84.4% |