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NC_027366.1__YP_009150968.1__CPT_Mater9__00009

Bact-Vir

NC_027366.1__YP_009150968.1__CPT_Mater9__00009

Identity

Accession:
NC_027366 ↗
Kingdom:
phage

Quality

89.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Matervirus› Bacillus_phage_Mater

TaxID: 1540090

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-53
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 49.0 4.41e-01 98.0% 57.1%
4cvnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 51.0 3.56e-01 94.0% 68.7%
1pp0B00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.62 49.0 3.40e-01 92.0% 93.8%
1rkbA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 50.0 3.48e-01 94.0% 31.2%
7dklA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 3.94e-01 100.0% 86.0%
1fshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.02e-01 98.0% 67.0%
2jhjA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.55 44.0 3.48e-01 96.0% 79.2%
6k6iA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.55 44.0 3.02e-01 98.0% 82.2%
3gmiA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 46.0 3.08e-01 98.0% 75.3%
1obhA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 42.0 2.68e-01 92.0% 71.2%
3f8tA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 40.0 2.55e-01 82.0% 14.2%
6tqfA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.54 39.0 2.38e-01 82.0% 53.2%
2gw1A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 39.0 2.33e-01 78.0% 11.4%
2ho4A02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 42.0 3.56e-01 92.0% 74.2%
2f1rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 39.0 2.86e-01 82.0% 42.6%
4h17A00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.53 45.0 3.01e-01 96.0% 68.0%
2fnaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 2.90e-01 94.0% 48.8%
5ly3A02 3.30.420.570 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.52 43.0 2.92e-01 100.0% 78.1%
6hfxA01 3.30.70.3040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 34.0 2.77e-01 100.0% 31.7%
2f22A00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.52 41.0 3.10e-01 92.0% 87.3%
4rfsS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.52 39.0 2.86e-01 96.0% 43.9%
7tjbA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.51 41.0 2.82e-01 94.0% 70.9%
6opmD01 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.51 38.0 2.52e-01 82.0% 54.2%
2yykA01 1.10.3140.10 Mainly Alpha › Orthogonal Bundle › 4-hydroxybutyryl-coa dehydratase, domain 1 › 4-hydroxybutyryl-coa dehydratase, domain 1 0.51 37.0 2.80e-01 80.0% 31.4%
8k9yA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 2.51e-01 88.0% 57.0%
3mizB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 42.0 3.09e-01 96.0% 87.8%
4inaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 38.0 2.63e-01 86.0% 93.9%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5066761 2004.1.1.192 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 0.67 54.0 3.73e-01 92.0% 72.2%
4034205 5069.1.1.5 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_II 0.65 44.0 3.09e-01 70.0% 21.9%
4970540 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 49.0 4.03e-01 100.0% 44.2%
4645731 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 49.0 2.72e-01 84.0% 7.0%
7045 858.1.1.1 ↗ a+b three layers › CytB endotoxin-like (Pfam 01338) › CytB endotoxin-like (Pfam 01338) › CytB endotoxin-like (Pfam 01338) › Bac_thur_toxin 0.63 50.0 3.44e-01 92.0% 93.7%
5063751 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 50.0 4.73e-01 100.0% 75.0%
4968381 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 43.0 2.54e-01 78.0% 11.6%
4971992 2003.1.1.386 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_C 0.59 47.0 2.81e-01 90.0% 66.8%
3691327 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 3.83e-01 100.0% 44.3%
3724312 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 48.0 4.13e-01 100.0% 57.6%
4071450 140.1.1.0 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.58 46.0 2.61e-01 92.0% 17.2%
3744869 109.30.1.6 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 › Nic96 0.57 47.0 2.78e-01 96.0% 86.0%
1240484 2002.1.1.111 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.57 40.0 2.46e-01 76.0% 40.9%
1201179 298.1.1.15 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Sacchrp_dh_C 0.56 43.0 2.86e-01 90.0% 99.2%
3803063 109.4.1.238 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP_TPR_like 0.56 39.0 2.38e-01 74.0% 14.3%
4075938 604.39.1.2 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › BioY 0.55 43.0 3.07e-01 98.0% 63.4%
3947868 2484.1.1.87 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MreB-like_C 0.55 44.0 3.21e-01 98.0% 80.0%
4666985 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 46.0 3.73e-01 98.0% 55.0%
4389819 101.1.1.8 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TEA 0.54 47.0 3.74e-01 100.0% 54.3%
5005987 532.2.1.0 ↗ alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains 0.54 46.0 3.09e-01 98.0% 25.2%
3725036 5081.1.1.2 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DER1 0.53 40.0 2.83e-01 92.0% 42.0%
5051605 6155.1.1.0 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.53 37.0 2.61e-01 76.0% 38.4%
3194261 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 39.0 3.14e-01 84.0% 80.9%
4980762 2003.1.1.386 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_C 0.53 39.0 2.42e-01 88.0% 12.0%
5003867 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.52 41.0 2.92e-01 96.0% 38.5%
3800950 188.1.1.0 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain 0.52 41.0 2.83e-01 98.0% 80.9%
5006377 2003.1.1.39 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP 0.52 39.0 2.39e-01 92.0% 13.6%
5015712 2003.1.5.54 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 0.51 38.0 2.58e-01 94.0% 93.2%
3388598 109.4.1.398 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FANCI_S1 0.51 38.0 2.65e-01 80.0% 38.9%
5031272 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.51 40.0 2.64e-01 90.0% 68.2%
3261517 5081.1.1.4 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.50 36.0 2.77e-01 86.0% 60.6%
3270364 3209.1.1.1 ↗ a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e 0.50 40.0 3.19e-01 98.0% 64.0%
3272724 2002.1.1.111 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.50 39.0 2.41e-01 88.0% 28.4%
3561503 330.7.1.0 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.50 34.0 3.26e-01 72.0% 83.3%
D2 medium residues 56-120
PDB
Domain cluster: rep: NC_031054.1__YP_009285213.1__BIZ88_gp271__00271__D6-64
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.69 47.0 4.38e-01 70.8% 61.3%
2xssA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.65 41.0 3.12e-01 100.0% 26.9%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 3.75e-01 96.9% 41.7%
5tuuA00 1.20.140.80 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP 0.63 43.0 3.33e-01 70.8% 55.6%
3gxwC00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 42.0 3.71e-01 73.8% 76.0%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.39e-01 100.0% 85.3%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 48.0 3.34e-01 96.9% 44.6%
4gxzD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 44.0 3.27e-01 81.5% 98.8%
3ihlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 42.0 2.94e-01 100.0% 22.7%
3rv0B03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 44.0 4.19e-01 92.3% 72.2%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.56 46.0 4.47e-01 96.9% 86.5%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.56 42.0 3.73e-01 95.4% 55.8%
3f42A00 3.30.1310.10 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain 0.56 36.0 3.25e-01 96.9% 47.3%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 49.0 4.36e-01 100.0% 89.2%
3hy3A00 3.40.50.10420 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NagB/RpiA/CoA transferase-like 0.55 38.0 2.71e-01 70.8% 56.1%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 48.0 4.34e-01 100.0% 95.7%
3c18A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 30.0 3.21e-01 80.0% 59.6%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 47.0 4.11e-01 100.0% 95.2%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 38.0 3.40e-01 73.8% 75.8%
1q7hA01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.55 32.0 3.30e-01 83.1% 56.9%
5j6bD01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.55 40.0 2.58e-01 76.9% 73.2%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 37.0 3.31e-01 98.5% 51.1%
4dunA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.54 38.0 3.04e-01 98.5% 37.8%
1f2uB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 38.0 2.87e-01 73.8% 54.5%
4hlbA00 3.30.70.2960 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 40.0 3.52e-01 95.4% 54.7%
1z3aA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.53 47.0 3.55e-01 100.0% 87.2%
3ffyA00 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.52 36.0 3.10e-01 96.9% 42.9%
4f87B00 3.30.720.190 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.52 34.0 3.45e-01 90.8% 69.4%
5ekcF01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 40.0 2.70e-01 87.7% 70.6%
6pnuB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 40.0 2.70e-01 87.7% 70.9%
6fjxA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 40.0 2.73e-01 87.7% 72.3%
3pm9A04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 36.0 3.34e-01 75.4% 86.2%
2zyzC00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.51 31.0 2.83e-01 100.0% 40.6%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.50 36.0 2.62e-01 75.4% 35.0%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.50 35.0 3.44e-01 96.9% 65.8%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3584390 7579.1.1.36 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.71 45.0 2.93e-01 100.0% 14.7%
4472719 171.1.1.9 ↗ alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, Ribonucleas_3_3 0.62 39.0 2.70e-01 80.0% 19.5%
3623796 4154.1.1.1 ↗ beta duplicates or obligate multimers › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F-DP heterodimerization region › DP 0.62 42.0 3.22e-01 70.8% 52.7%
4988857 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.61 41.0 3.50e-01 70.8% 76.2%
4028609 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.60 40.0 2.99e-01 96.9% 26.5%
5066057 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.59 33.0 3.04e-01 81.5% 38.9%
5073130 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.58 51.0 4.29e-01 100.0% 91.2%
141070 223.3.1.1 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.58 34.0 3.60e-01 95.4% 64.9%
4647118 5086.1.1.119 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › RRG1_C 0.58 40.0 2.77e-01 73.8% 36.4%
3510148 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 51.0 4.08e-01 100.0% 73.1%
5067143 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 39.0 3.24e-01 70.8% 58.3%
3784907 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.57 47.0 4.42e-01 96.9% 88.2%
3249582 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.57 47.0 4.55e-01 96.9% 85.3%
3627795 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 4.57e-01 98.5% 76.5%
3975926 2.4.1.17 ↗ beta barrels › OB-fold › MOP-like › MOP-like › DUF7765 0.57 43.0 3.97e-01 81.5% 72.9%
3443252 263.1.1.0 ↗ a+b three layers › SRF-like › SRF-like › SRF-like 0.57 35.0 4.14e-01 89.2% 91.1%
3923911 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.56 46.0 4.48e-01 96.9% 84.0%
3850090 4099.1.1.19 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM8 0.56 39.0 3.08e-01 72.3% 59.4%
3890772 263.1.1.0 ↗ a+b three layers › SRF-like › SRF-like › SRF-like 0.56 36.0 3.49e-01 100.0% 57.3%
3399510 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.56 46.0 4.45e-01 96.9% 85.3%
1170594 885.1.1.1 ↗ a+b complex topology › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › NusA_N 0.56 42.0 3.73e-01 95.4% 55.8%
3449709 7579.1.1.14 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.55 48.0 2.96e-01 100.0% 79.3%
3236943 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.55 37.0 3.16e-01 70.8% 77.8%
3965732 304.13.1.1 ↗ a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB 0.54 38.0 3.33e-01 100.0% 48.0%
3491910 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.54 40.0 3.84e-01 98.5% 68.0%
3721003 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 48.0 2.95e-01 100.0% 16.5%
3399731 3016.1.1.21 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › PDXDC1-like_cen 0.53 38.0 2.81e-01 73.8% 47.7%
3175415 211.1.1.55 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF29700 0.52 38.0 3.92e-01 89.2% 86.7%
5010022 304.39.1.0 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.52 37.0 3.41e-01 100.0% 57.6%
3686259 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.52 41.0 2.72e-01 90.8% 75.8%
5042930 3563.1.1.1 ↗ alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC 0.51 42.0 2.96e-01 100.0% 47.6%
3674608 327.4.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain 0.51 39.0 3.60e-01 83.1% 97.6%
3527281 223.2.1.4 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.51 40.0 3.02e-01 90.8% 64.3%
3802552 601.1.1.91 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF1218 0.51 38.0 2.92e-01 83.1% 84.8%
3498546 304.162.1.2 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.50 37.0 3.57e-01 100.0% 68.0%
3549847 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.50 43.0 2.71e-01 100.0% 28.5%
D3 medium residues 123-155
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6hoyA02 2.20.28.200 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.82 65.0 5.75e-01 90.9% 87.8%
2gnrA01 6.10.30.10 Special › Helix non-globular › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › 0.81 62.0 5.09e-01 93.9% 46.4%
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.80 65.0 3.75e-01 97.0% 11.8%
2lcqA02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.80 66.0 6.42e-01 100.0% 92.1%
2apoB00 2.20.28.40 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › H/ACA ribonucleoprotein complex, subunit Nop10 0.79 59.0 5.10e-01 90.9% 50.9%
1kk1A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 66.0 4.05e-01 97.0% 73.5%
2ayjA00 4.10.1060.50 Few Secondary Structures › Irregular › ZNF265 like › 0.76 61.0 5.25e-01 93.9% 57.1%
1yuzA02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.72 53.0 5.22e-01 87.9% 86.8%
2vl6A03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.72 55.0 5.06e-01 93.9% 97.9%
4xxbB00 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.70 52.0 4.92e-01 81.8% 64.3%
3b08E00 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.70 53.0 4.52e-01 87.9% 52.5%
4aybP00 2.20.28.30 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase ii, chain L 0.69 53.0 5.13e-01 100.0% 84.1%
2g3mA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.66 51.0 3.97e-01 87.9% 40.0%
3zo9B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 52.0 3.77e-01 97.0% 40.0%
1m6uA00 2.60.40.1390 Mainly Beta › Sandwich › Immunoglobulin-like › NDT80 DNA-binding domain 0.62 48.0 2.95e-01 100.0% 60.0%
5i0fB04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 51.0 3.93e-01 100.0% 42.9%
2ff4A03 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.61 50.0 3.74e-01 100.0% 95.9%
3m4xA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.55 42.0 3.32e-01 100.0% 64.8%
4oifA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 41.0 3.43e-01 90.9% 48.4%
2ofqA01 2.60.40.2500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.16e-01 100.0% 47.2%
3rosA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 37.0 2.26e-01 87.9% 58.6%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5023102 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.90 69.0 4.68e-01 84.8% 25.5%
5071328 375.1.1.48 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N 0.90 76.0 6.41e-01 97.0% 58.2%
5059159 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.87 76.0 5.17e-01 100.0% 29.2%
4933086 375.1.1.181 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PALP 0.86 76.0 5.07e-01 100.0% 27.5%
4991657 375.1.1.48 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N 0.86 71.0 7.03e-01 97.0% 94.3%
4967717 375.1.1.181 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PALP 0.85 75.0 7.40e-01 100.0% 97.1%
5068448 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.84 73.0 4.96e-01 100.0% 28.7%
5050748 375.1.1.204 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central 0.84 73.0 5.11e-01 100.0% 36.3%
3324372 375.1.1.59 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin_2 0.83 62.0 6.38e-01 84.8% 100.0%
5007824 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.83 73.0 6.87e-01 100.0% 82.5%
4988770 2006.1.3.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.82 68.0 4.25e-01 97.0% 34.3%
5036844 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.82 69.0 6.35e-01 100.0% 73.3%
5063434 375.1.1.48 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N 0.82 66.0 6.12e-01 97.0% 73.3%
5076013 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.82 68.0 6.36e-01 97.0% 100.0%
4933180 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.81 67.0 6.67e-01 97.0% 94.3%
3388197 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.81 60.0 6.17e-01 84.8% 100.0%
119408 375.1.1.48 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N 0.81 62.0 6.26e-01 93.9% 94.1%
4338996 375.1.1.60 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PriA_CRR 0.81 62.0 5.19e-01 87.9% 93.3%
4983060 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.80 67.0 5.12e-01 100.0% 88.7%
4241211 375.1.1.204 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central 0.79 69.0 4.80e-01 100.0% 34.3%
5001541 2500.1.1.5 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.77 68.0 3.65e-01 100.0% 5.9%
5050543 375.1.1.48 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N 0.77 61.0 5.36e-01 97.0% 58.2%
2507149 375.1.1.48 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N 0.77 63.0 6.34e-01 97.0% 94.1%
4158088 375.1.1.218 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_Ribbon_1 0.77 64.0 5.90e-01 100.0% 75.6%
3517439 375.1.1.25 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tfb4 0.77 63.0 5.33e-01 100.0% 55.0%
3865327 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 55.0 5.48e-01 78.8% 74.3%
3619241 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.76 59.0 4.90e-01 90.9% 48.4%
4163070 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 60.0 3.56e-01 100.0% 12.4%
5036185 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 62.0 5.25e-01 100.0% 60.0%
4390953 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 57.0 5.82e-01 90.9% 100.0%
3838150 375.1.1.59 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin_2 0.75 58.0 5.54e-01 100.0% 75.6%
4638791 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.75 61.0 3.84e-01 97.0% 32.4%
3206604 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 57.0 5.66e-01 90.9% 94.3%
3385707 375.1.1.59 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin_2 0.74 53.0 5.42e-01 84.8% 100.0%
3269360 375.4.1.0 ↗ few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like 0.74 53.0 5.48e-01 81.8% 90.0%
5047644 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 61.0 5.68e-01 100.0% 73.3%
135922 375.1.1.4 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP 0.74 53.0 5.48e-01 78.8% 100.0%
4927062 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 60.0 5.60e-01 100.0% 73.3%
4946660 386.1.1.420 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DZR 0.74 60.0 4.91e-01 100.0% 48.6%
3511138 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 56.0 5.33e-01 87.9% 72.5%
4963576 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 59.0 5.92e-01 100.0% 91.4%
5037576 2500.1.1.0 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.73 60.0 3.35e-01 100.0% 7.3%
3291263 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 56.0 5.61e-01 97.0% 94.3%
3435899 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 55.0 5.61e-01 84.8% 93.3%
3479896 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 52.0 4.97e-01 78.8% 65.0%
5076714 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 54.0 4.73e-01 87.9% 54.5%
3227443 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.72 55.0 4.52e-01 87.9% 45.3%
3701761 375.1.1.133 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ribbon_3 0.72 53.0 5.26e-01 87.9% 97.1%
3924201 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.70 54.0 4.52e-01 90.9% 46.9%
3448510 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.70 53.0 4.44e-01 90.9% 46.2%
3508549 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.70 54.0 5.00e-01 90.9% 66.7%
3287879 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 50.0 5.03e-01 90.9% 100.0%
3393166 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.69 52.0 4.40e-01 90.9% 46.2%
4326569 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.69 53.0 4.39e-01 90.9% 46.2%
2323970 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.69 51.0 4.28e-01 87.9% 44.6%
3701763 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.68 50.0 4.87e-01 87.9% 95.0%
3418268 375.1.1.229 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TEX13 0.68 50.0 5.09e-01 87.9% 96.7%
3797415 375.10.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha 0.68 52.0 3.63e-01 90.9% 25.0%
3388521 375.1.1.219 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4H2 0.67 49.0 5.04e-01 84.8% 93.3%
3788516 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.67 50.0 3.17e-01 87.9% 14.9%
4442768 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.67 51.0 4.30e-01 90.9% 46.2%
4957556 375.2.1.3 ↗ few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like › DZR 0.67 51.0 4.35e-01 90.9% 86.7%
3819271 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.67 50.0 4.24e-01 90.9% 46.2%
3532376 375.4.1.6 ↗ few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like › Zn_Ribbon_1 0.67 48.0 4.90e-01 84.8% 93.3%
4283998 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.67 50.0 4.29e-01 87.9% 48.3%
3487979 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 49.0 4.95e-01 84.8% 93.3%
4432935 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.66 51.0 4.26e-01 90.9% 46.2%
4997635 376.1.1.182 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zn_ribbon_3 0.66 49.0 3.85e-01 87.9% 46.3%
3715868 375.10.1.2 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.65 47.0 4.07e-01 90.9% 46.7%
4111189 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 50.0 4.26e-01 90.9% 61.7%
5068820 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 51.0 4.10e-01 100.0% 93.3%
3959677 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 46.0 4.09e-01 84.8% 65.5%
3895601 376.1.1.78 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zf_2nd_IFT121 0.60 43.0 3.31e-01 87.9% 42.1%
5051725 375.2.1.0 ↗ few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like 0.59 42.0 4.25e-01 81.8% 90.0%