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NC_027368.1__YP_009948771.1__ACQ26_gp18__00018

Bact-Vir

NC_027368.1__YP_009948771.1__ACQ26_gp18__00018

Identity

Accession:
NC_027368 ↗
Kingdom:
phage

Quality

93.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Vulnificusvirus› Vibrio_phage_PV94

TaxID: 1451050

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-90
PDB
Domain cluster: rep: OL348188.1__UGC97292.1__X__00035__D13-94
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.77 46.0 5.32e-01 100.0% 83.3%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 43.0 4.97e-01 100.0% 76.7%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.69 40.0 4.63e-01 100.0% 82.5%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 39.0 4.31e-01 100.0% 69.7%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.68 38.0 3.58e-01 100.0% 44.1%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 41.0 4.58e-01 100.0% 78.5%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 39.0 4.90e-01 100.0% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 38.0 4.23e-01 100.0% 71.9%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 40.0 4.83e-01 100.0% 94.7%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 43.0 4.88e-01 100.0% 90.6%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.64 43.0 3.12e-01 100.0% 28.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 40.0 4.70e-01 100.0% 91.7%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.63 37.0 4.28e-01 100.0% 83.1%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 37.0 4.28e-01 100.0% 83.1%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 41.0 4.67e-01 100.0% 91.9%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 40.0 3.78e-01 100.0% 56.1%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 40.0 4.36e-01 100.0% 80.9%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 40.0 4.17e-01 100.0% 72.4%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.61 37.0 4.51e-01 100.0% 100.0%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 42.0 4.73e-01 100.0% 93.7%
2creA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 41.0 4.42e-01 100.0% 81.7%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 41.0 4.75e-01 100.0% 96.7%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 42.0 4.67e-01 100.0% 90.9%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 39.0 4.50e-01 100.0% 93.2%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 40.0 4.23e-01 100.0% 77.3%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 43.0 4.53e-01 100.0% 84.2%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 38.0 3.85e-01 100.0% 67.9%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.57 41.0 4.34e-01 100.0% 84.2%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.56 34.0 3.70e-01 100.0% 71.8%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.55 33.0 3.58e-01 100.0% 70.4%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 35.0 4.08e-01 100.0% 98.2%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 39.0 4.16e-01 100.0% 86.7%
4oo1I01 2.40.50.880 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 31.0 3.28e-01 89.3% 64.0%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.50 37.0 4.06e-01 98.8% 93.0%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954284 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 39.0 4.50e-01 100.0% 71.7%
3925408 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 41.0 5.18e-01 100.0% 94.0%
3604145 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 40.0 4.61e-01 100.0% 76.7%
3393347 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 42.0 4.11e-01 100.0% 54.4%
4680376 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.70 38.0 4.57e-01 100.0% 80.0%
4985969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 40.0 4.55e-01 100.0% 78.3%
3712782 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 41.0 4.21e-01 100.0% 61.3%
4640515 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.69 37.0 4.50e-01 100.0% 84.0%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 41.0 4.69e-01 100.0% 81.7%
4973749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 39.0 4.22e-01 100.0% 65.7%
4953054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 39.0 4.11e-01 100.0% 61.3%
4124780 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 41.0 4.39e-01 100.0% 68.5%
4122525 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 42.0 4.45e-01 100.0% 69.3%
4547820 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 40.0 3.67e-01 100.0% 45.7%
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 39.0 3.99e-01 100.0% 58.7%
3414912 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 39.0 3.64e-01 100.0% 46.7%
3876823 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 42.0 4.51e-01 100.0% 73.3%
5033892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 42.0 4.60e-01 100.0% 81.5%
3924213 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 38.0 3.63e-01 100.0% 49.5%
4610859 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 42.0 4.77e-01 100.0% 84.6%
3599257 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 43.0 4.83e-01 100.0% 86.2%
3914833 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 43.0 4.71e-01 100.0% 81.4%
4660084 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 39.0 4.21e-01 100.0% 71.0%
5063433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 36.0 4.30e-01 100.0% 88.0%
3579591 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.65 38.0 4.57e-01 100.0% 89.1%
3512902 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.65 39.0 4.58e-01 100.0% 90.9%
3231675 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 43.0 4.66e-01 100.0% 81.4%
3522910 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 43.0 4.54e-01 100.0% 76.0%
4420173 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.64 38.0 3.99e-01 100.0% 65.3%
3548244 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 41.0 4.81e-01 100.0% 91.7%
3482677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 44.0 4.75e-01 100.0% 84.3%
4105328 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.63 37.0 4.16e-01 100.0% 75.4%
3484477 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 42.0 4.64e-01 100.0% 82.9%
3543889 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 40.0 2.51e-01 100.0% 13.1%
3547084 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 36.0 3.57e-01 100.0% 52.2%
3399557 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 41.0 4.45e-01 100.0% 81.4%
3931418 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 39.0 4.55e-01 100.0% 91.7%
3866038 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.61 35.0 3.49e-01 100.0% 54.1%
4056584 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 40.0 4.09e-01 100.0% 70.0%
3920897 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 41.0 4.40e-01 100.0% 78.7%
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 36.0 3.92e-01 100.0% 70.0%
4119802 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 40.0 4.47e-01 100.0% 87.7%
4942163 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 37.0 4.06e-01 100.0% 76.9%
4020558 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 39.0 4.40e-01 100.0% 86.2%
4483819 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 40.0 4.34e-01 100.0% 81.4%
3998645 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 39.0 4.38e-01 100.0% 86.2%
3391702 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 40.0 4.08e-01 100.0% 71.2%
3885695 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 40.0 4.08e-01 100.0% 71.2%
3487686 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 39.0 3.97e-01 100.0% 67.1%
3597690 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 38.0 4.15e-01 100.0% 80.0%
3926701 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 39.0 4.29e-01 100.0% 85.3%
2121553 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 40.0 4.33e-01 100.0% 85.7%
3888226 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 40.0 4.24e-01 100.0% 80.0%
3797970 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 40.0 3.92e-01 100.0% 66.7%
3389584 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 39.0 3.91e-01 100.0% 70.6%
4018455 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 39.0 2.60e-01 100.0% 20.0%
3755099 604.1.1.97 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SH3_1 0.56 37.0 3.71e-01 100.0% 67.1%
3189501 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 42.0 4.35e-01 100.0% 83.7%
3692073 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.55 37.0 3.95e-01 100.0% 81.4%
3523030 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.55 40.0 4.46e-01 100.0% 98.5%
3771628 189.1.1.0 ↗ alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP 0.55 38.0 2.55e-01 100.0% 19.4%
3539094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 40.0 4.09e-01 100.0% 82.5%
3910605 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 38.0 3.95e-01 100.0% 80.0%
3485667 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.52 37.0 3.91e-01 100.0% 85.3%