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NC_027368.1__YP_009948776.1__ACQ26_gp23__00023

Bact-Vir

NC_027368.1__YP_009948776.1__ACQ26_gp23__00023

Identity

Accession:
NC_027368 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-69
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kdrA02 3.40.140.120 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › 0.83 69.0 5.62e-01 100.0% 49.6%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 41.0 4.32e-01 79.7% 76.2%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 43.0 4.38e-01 79.7% 75.7%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 4.34e-01 82.6% 84.5%
1xovA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 43.0 4.37e-01 75.4% 90.9%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 4.04e-01 81.2% 71.0%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 42.0 4.71e-01 82.6% 100.0%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 45.0 4.70e-01 82.6% 98.4%
2l6oA01 2.40.10.320 Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain 0.58 35.0 3.52e-01 81.2% 56.9%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.58 39.0 4.40e-01 84.1% 100.0%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 3.98e-01 81.2% 68.8%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 46.0 4.66e-01 88.4% 90.0%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 4.19e-01 82.6% 90.9%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 41.0 4.12e-01 78.3% 91.2%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 42.0 4.32e-01 79.7% 95.5%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 40.0 4.14e-01 76.8% 100.0%
1ri9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 41.0 3.97e-01 79.7% 74.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 41.0 3.75e-01 88.4% 61.1%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 46.0 3.57e-01 100.0% 87.3%
2yocA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.22e-01 81.2% 46.3%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.54 44.0 4.19e-01 88.4% 80.0%
6efaA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 38.0 3.72e-01 75.4% 69.2%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 40.0 4.10e-01 79.7% 89.4%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 42.0 4.47e-01 87.0% 100.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.53 39.0 4.09e-01 81.2% 96.8%
4h4nA00 2.60.40.3750 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.91e-01 87.0% 82.3%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.53 33.0 3.59e-01 81.2% 84.0%
3bt3A01 3.30.1900.10 Alpha Beta › 2-Layer Sandwich › glyoxalase-related enzyme like fold › glyoxalase-related enzyme like domain 0.52 35.0 3.54e-01 75.4% 68.1%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 3.56e-01 89.9% 97.5%
1awjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 41.0 4.07e-01 91.3% 83.1%
2qlcA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.52 41.0 3.43e-01 95.7% 47.6%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.52 37.0 3.84e-01 81.2% 81.8%
3pfmA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.52 40.0 2.79e-01 85.5% 93.4%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.52 37.0 3.47e-01 81.2% 94.7%
3m70A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 33.0 2.91e-01 81.2% 42.5%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 42.0 4.28e-01 92.8% 97.1%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 37.0 3.69e-01 81.2% 74.6%
3obqA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.51 39.0 3.19e-01 85.5% 62.4%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 38.0 3.57e-01 81.2% 65.1%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 39.0 4.09e-01 87.0% 93.5%
1dc1A01 3.40.91.10 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.50 38.0 2.69e-01 81.2% 38.3%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3949049 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.90 70.0 6.51e-01 81.2% 68.7%
4034031 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.88 68.0 7.01e-01 81.2% 93.8%
5039293 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.87 68.0 6.56e-01 81.2% 88.0%
3964370 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.87 67.0 6.20e-01 81.2% 77.6%
4031151 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.85 65.0 6.34e-01 81.2% 85.3%
5082482 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.85 64.0 6.25e-01 79.7% 81.3%
3942998 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.82 63.0 6.31e-01 81.2% 87.1%
146202 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.79 54.0 5.95e-01 79.7% 92.5%
4472438 220.4.1.10 beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins › DUF3586 0.71 52.0 4.88e-01 78.3% 98.8%
4137160 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.68 52.0 4.96e-01 82.6% 76.2%
3597350 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.67 49.0 4.64e-01 78.3% 98.8%
3610541 73.1.1.11 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › DUF3586 0.67 49.0 4.67e-01 79.7% 100.0%
3930643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.83e-01 81.2% 88.3%
5024227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 45.0 4.68e-01 81.2% 84.1%
4948250 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.62 45.0 4.69e-01 78.3% 90.8%
4091771 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 44.0 4.63e-01 79.7% 88.3%
4015385 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.61 42.0 3.09e-01 72.5% 58.5%
4218142 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.60 39.0 3.52e-01 79.7% 47.0%
3478898 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.36e-01 81.2% 80.0%
3200493 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 42.0 4.53e-01 84.1% 92.7%
3501448 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 51.0 5.14e-01 100.0% 98.6%
3937333 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.20e-01 81.2% 68.8%
3934126 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 43.0 4.53e-01 79.7% 90.0%
3241817 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 41.0 4.35e-01 79.7% 85.0%
3778581 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 45.0 4.38e-01 82.6% 80.0%
4147366 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.58 37.0 4.12e-01 81.2% 93.8%
2784372 4.1.1.8 beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.58 40.0 4.14e-01 79.7% 79.4%
4207556 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.58 43.0 4.35e-01 81.2% 100.0%
4982354 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.58 43.0 4.41e-01 81.2% 86.2%
3989485 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.57 37.0 4.05e-01 81.2% 90.0%
4520767 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.57 41.0 4.16e-01 76.8% 88.6%
3505913 221.1.1.112 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_3 0.57 41.0 3.66e-01 79.7% 73.4%
4068333 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 42.0 4.35e-01 79.7% 98.5%
3926672 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 43.0 4.42e-01 81.2% 89.2%
3840076 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.57 40.0 4.18e-01 73.9% 100.0%
3251743 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.57 44.0 4.14e-01 84.1% 95.2%
5041727 2492.1.1.0 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.56 51.0 3.87e-01 100.0% 47.5%
1673571 4.1.1.120 beta barrels › SH3 › SH3 › SH3 › SH3_16 0.56 43.0 4.16e-01 81.2% 86.8%
3660358 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 39.0 4.11e-01 79.7% 85.0%
3264879 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 38.0 3.79e-01 79.7% 70.0%
3702915 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 41.0 4.38e-01 81.2% 96.7%
4994895 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.55 41.0 3.93e-01 81.2% 76.2%
3222210 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 42.0 4.18e-01 81.2% 82.9%
3514867 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 41.0 4.03e-01 81.2% 77.3%
3556601 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.54 40.0 4.15e-01 79.7% 84.6%
2844732 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.54 41.0 3.49e-01 84.1% 92.0%
3572393 4.1.1.99 beta barrels › SH3 › SH3 › SH3 › SH3_10 0.54 41.0 4.10e-01 81.2% 80.0%
1545880 4.1.1.278 beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.54 42.0 4.08e-01 87.0% 81.2%
4083915 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.54 41.0 4.00e-01 82.6% 93.3%
3799828 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 35.0 2.27e-01 91.3% 15.6%
3541996 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.53 41.0 2.99e-01 82.6% 31.1%
3779830 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.53 39.0 3.64e-01 79.7% 61.1%
3895142 5.1.3.216 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_HPS5 0.53 39.0 2.90e-01 79.7% 57.4%
3224532 3534.1.1.3 beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF4505 0.53 39.0 3.69e-01 98.6% 65.1%
2890675 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 41.0 4.24e-01 84.1% 96.9%
3280482 2492.1.1.9 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › RadC 0.53 42.0 3.51e-01 91.3% 50.0%
3488745 11.1.1.805 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_PDGFR_d4 0.53 41.0 3.54e-01 84.1% 62.7%
4629735 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.93e-01 79.7% 83.1%
5037289 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.52 38.0 4.03e-01 87.0% 93.3%
4249943 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 30.0 3.47e-01 92.8% 86.7%
5015352 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.69e-01 82.6% 68.7%
3564972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.75e-01 79.7% 75.7%
4929875 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.51 45.0 4.00e-01 100.0% 76.0%
3742938 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.51 38.0 3.97e-01 85.5% 86.2%
3714156 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 40.0 3.75e-01 85.5% 70.6%
4215717 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 38.0 3.82e-01 79.7% 81.2%
3556321 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.51 37.0 3.63e-01 81.2% 83.7%
3712451 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 39.0 3.28e-01 85.5% 48.0%
4851980 3398.1.1.2 a/b three-layered sandwiches › STING C-terminal domain › STING C-terminal domain › STING C-terminal domain › prok_STING 0.50 35.0 2.80e-01 75.4% 50.3%
5063004 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 37.0 3.83e-01 81.2% 95.4%
5031165 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.50 37.0 3.75e-01 79.7% 80.0%
D2 medium residues 82-109_163-212
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l9fA02 6.10.140.1570 Special › Helix non-globular › Helix Hairpins › 0.72 50.0 4.98e-01 97.4% 69.1%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 48.0 4.36e-01 70.5% 56.9%
1jogA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.70 55.0 4.61e-01 85.9% 74.8%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.68 46.0 4.95e-01 70.5% 98.4%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.68 46.0 5.08e-01 70.5% 98.3%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 49.0 5.02e-01 76.9% 94.5%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.67 49.0 5.08e-01 76.9% 93.0%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 45.0 4.39e-01 70.5% 78.8%
2etnB01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.65 44.0 4.52e-01 70.5% 75.0%
1kyoF00 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.64 48.0 4.91e-01 98.7% 82.4%
1y6xA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.64 46.0 4.44e-01 80.8% 66.7%
1b06A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.64 48.0 5.09e-01 97.4% 92.5%
4a4kA01 1.20.1500.20 Mainly Alpha › Up-down Bundle › YheA-like fold › 0.64 44.0 3.87e-01 70.5% 51.3%
6p73A02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.64 47.0 3.90e-01 79.5% 48.3%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 43.0 4.03e-01 70.5% 64.6%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 45.0 4.61e-01 74.4% 91.8%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.63 42.0 4.53e-01 70.5% 95.3%
1op1A00 1.20.81.10 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain 0.62 46.0 4.56e-01 87.2% 74.4%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 47.0 4.05e-01 100.0% 51.6%
6n7pX01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 54.0 3.65e-01 98.7% 38.8%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 46.0 4.69e-01 96.2% 85.1%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.60 45.0 4.69e-01 100.0% 88.7%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 46.0 4.58e-01 97.4% 81.5%
5lnkA00 1.20.58.1610 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 0.59 38.0 3.38e-01 70.5% 44.3%
4aybA07 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.59 44.0 3.85e-01 79.5% 79.2%
1kfdA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.59 45.0 4.75e-01 100.0% 93.0%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.57 47.0 4.48e-01 97.4% 77.8%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.57 45.0 4.42e-01 100.0% 79.3%
2l35A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.56 40.0 4.36e-01 96.2% 95.2%
2fb5A01 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.56 43.0 4.45e-01 100.0% 93.1%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.54 40.0 3.60e-01 78.2% 78.9%
1bf5A01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.53 47.0 3.72e-01 100.0% 83.9%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.53 42.0 4.22e-01 100.0% 87.3%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.53 38.0 3.90e-01 100.0% 81.1%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.53 38.0 3.76e-01 78.2% 72.4%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.53 38.0 3.83e-01 75.6% 87.3%
2f2gA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.52 46.0 3.38e-01 100.0% 55.3%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.50 41.0 4.13e-01 97.4% 91.0%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3283686 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.74 53.0 5.59e-01 74.4% 82.9%
3212195 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.74 46.0 4.13e-01 70.5% 45.5%
1002194 192.23.1.1 alpha bundles › Long alpha-hairpin › DUF683 › DUF683 › Rop-like 0.69 51.0 5.38e-01 97.4% 85.9%
4228184 192.4.1.1 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 0.69 45.0 4.13e-01 70.5% 49.5%
3472879 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.69 47.0 4.40e-01 70.5% 58.9%
3876590 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.68 47.0 4.56e-01 70.5% 69.4%
4860885 633.6.1.6 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACAD9-ACADV_C 0.68 52.0 4.70e-01 100.0% 60.0%
4493879 4992.1.1.23 extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.68 46.0 4.12e-01 70.5% 56.4%
3477418 4992.1.1.12 extended segments › RelB-like › RelB-like › RelB-like › LIN9_C 0.68 52.0 4.93e-01 83.3% 96.8%
3468553 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.66 44.0 3.61e-01 70.5% 38.6%
3684566 192.15.1.85 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF3755 0.65 50.0 5.06e-01 84.6% 91.3%
3409871 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.65 44.0 2.69e-01 70.5% 12.5%
3363051 605.4.1.0 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein 0.64 47.0 4.49e-01 100.0% 67.8%
3465588 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.63 48.0 4.36e-01 80.8% 87.6%
3601441 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 46.0 4.25e-01 79.5% 70.0%
3595968 605.2.1.0 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 0.61 46.0 4.56e-01 100.0% 77.5%
4878961 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.61 50.0 4.53e-01 91.0% 69.2%
4959943 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.61 43.0 4.34e-01 75.6% 76.2%
3470858 5041.1.1.1 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.60 41.0 3.90e-01 70.5% 62.1%
3847053 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.60 42.0 4.32e-01 75.6% 90.7%
3600095 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 49.0 3.21e-01 92.3% 75.9%
4619538 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.58 43.0 3.86e-01 100.0% 54.8%
4206858 4992.1.1.23 extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.58 43.0 3.84e-01 100.0% 54.8%
4034092 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.56 46.0 4.74e-01 97.4% 94.7%
3741115 109.4.1.138 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PAT1 0.56 48.0 3.33e-01 100.0% 34.7%
4977416 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.56 49.0 3.52e-01 100.0% 91.6%
3184698 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.56 48.0 4.57e-01 98.7% 82.2%
3450792 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.54 47.0 4.07e-01 100.0% 60.8%
4000626 5043.1.1.11 extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like › ATP_synt_H 0.54 38.0 3.86e-01 100.0% 73.8%
5063898 4958.1.1.2 a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_4 0.54 43.0 3.15e-01 89.7% 63.0%
4853348 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.53 43.0 4.22e-01 100.0% 82.4%
3674356 5069.1.3.13 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › TB2_DP1_HVA22 0.53 38.0 3.82e-01 100.0% 75.0%
4879470 5057.1.1.1 alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb 0.52 42.0 4.26e-01 100.0% 93.3%
3720672 109.4.1.1591 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U-box 0.52 44.0 3.02e-01 93.6% 32.9%
D3 medium residues 110-162
PDB
Domain cluster: representative
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t4yA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.74 63.0 5.39e-01 98.1% 71.9%
1r5pB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.74 65.0 5.40e-01 100.0% 96.8%
3mydA01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.72 63.0 4.62e-01 100.0% 43.8%
3bypA00 3.30.70.1350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain 0.70 52.0 4.55e-01 81.1% 93.9%
1ofuA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.70 59.0 5.04e-01 100.0% 60.2%
2btoB02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.70 58.0 4.81e-01 100.0% 54.8%
2npbA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 59.0 5.00e-01 100.0% 98.9%
4f9zA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 56.0 4.50e-01 100.0% 58.6%
2k18A02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 56.0 4.39e-01 100.0% 55.3%
4fo5A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 55.0 4.23e-01 100.0% 66.9%
4nwyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 55.0 4.29e-01 100.0% 53.1%
5ykwA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 56.0 4.56e-01 100.0% 59.4%
3cb2A02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.65 56.0 4.67e-01 100.0% 58.6%
3e6qA00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.65 50.0 3.85e-01 84.9% 88.1%
4b45A02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.65 55.0 4.36e-01 100.0% 45.8%
1iloA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 53.0 4.81e-01 96.2% 75.3%
3kanA00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.65 53.0 4.31e-01 100.0% 53.0%
2os5A00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.65 53.0 4.29e-01 100.0% 52.5%
4m1aA00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.65 53.0 4.34e-01 96.2% 57.9%
2l5oA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 56.0 4.13e-01 100.0% 58.7%
2es7A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 53.0 4.39e-01 98.1% 60.2%
2ljkA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 55.0 4.85e-01 100.0% 96.3%
3i3fB00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.64 54.0 4.19e-01 100.0% 44.5%
1w5fA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.64 53.0 4.23e-01 100.0% 48.3%
2r2jA03 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 52.0 3.98e-01 98.1% 47.5%
2dbcA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 54.0 4.13e-01 100.0% 44.4%
2l5lA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 53.0 4.06e-01 100.0% 44.9%
5j7dC00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 53.0 4.35e-01 100.0% 60.4%
2btqB02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.63 54.0 4.58e-01 100.0% 60.9%
2kdxA00 3.30.2320.80 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › 0.63 52.0 4.17e-01 100.0% 73.9%
1w5eB02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.63 52.0 4.33e-01 100.0% 52.8%
2l57A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 51.0 4.07e-01 100.0% 51.6%
3a43A01 3.30.2320.50 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › 0.62 52.0 4.70e-01 100.0% 68.4%
2fy6A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 52.0 3.95e-01 100.0% 62.2%
4i6xA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 52.0 4.18e-01 100.0% 56.4%
1cgqA00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.62 50.0 4.11e-01 100.0% 55.7%
2fa8B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 51.0 4.46e-01 98.1% 60.9%
5aykA07 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 50.0 4.11e-01 100.0% 54.8%
2b5eA03 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 49.0 3.94e-01 100.0% 50.4%
2b5eA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 49.0 4.01e-01 100.0% 54.6%
2gs3A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 49.0 3.64e-01 100.0% 66.1%
3cynB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 49.0 3.62e-01 100.0% 62.4%
4nx1A00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.61 49.0 3.19e-01 98.1% 71.8%
2pptA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 50.0 4.16e-01 100.0% 57.5%
3ed3A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 49.0 3.96e-01 100.0% 54.5%
2l42A00 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.61 48.0 4.14e-01 96.2% 56.7%
2b5xA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 51.0 3.81e-01 100.0% 61.5%
1ovnB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 48.0 3.92e-01 100.0% 57.7%
2r75102 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.60 49.0 4.06e-01 100.0% 50.9%
1g7eA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 48.0 3.91e-01 100.0% 56.6%
3tcoA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 48.0 4.06e-01 100.0% 60.4%
1x5eA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 49.0 4.05e-01 100.0% 56.0%
2ig8A00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.60 49.0 3.75e-01 100.0% 40.8%
1vk3A02 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.60 51.0 3.85e-01 100.0% 40.7%
1jfuA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 50.0 3.58e-01 100.0% 50.6%
3hz4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 48.0 3.89e-01 100.0% 52.5%
6i1cA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 48.0 4.01e-01 100.0% 57.4%
2dj0A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 48.0 3.84e-01 100.0% 55.6%
4cw9B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 48.0 4.05e-01 100.0% 58.7%
4j56E00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 48.0 4.04e-01 100.0% 60.0%
3vfiA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 48.0 4.04e-01 100.0% 58.7%
3apoA06 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 48.0 3.94e-01 100.0% 55.8%
2h8lA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 47.0 3.92e-01 100.0% 49.6%
1qmiA02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.58 48.0 4.17e-01 100.0% 59.3%
3qdnA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 47.0 3.92e-01 100.0% 54.0%
4euyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 44.0 4.01e-01 100.0% 58.1%
3or5A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 46.0 3.60e-01 100.0% 64.1%
1grxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 47.0 4.19e-01 100.0% 77.6%
4o89A02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.58 47.0 4.07e-01 100.0% 60.6%
3gnjA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 47.0 3.89e-01 100.0% 56.8%
1ck7A01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.58 47.0 3.17e-01 96.2% 35.3%
2diyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 45.0 3.83e-01 100.0% 55.0%
3lmeC00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.58 47.0 3.74e-01 100.0% 44.9%
2lrcA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 48.0 3.93e-01 98.1% 78.7%
1xbsA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 45.0 3.57e-01 100.0% 46.0%
2remB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 46.0 3.34e-01 100.0% 72.7%
1pf5A00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.56 45.0 3.56e-01 100.0% 40.0%
3lybC00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.56 46.0 3.61e-01 100.0% 41.0%
2gviA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.56 45.0 3.81e-01 100.0% 51.5%
2hraA01 3.40.30.70 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.56 45.0 3.92e-01 98.1% 56.2%
4a5pB01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.55 43.0 3.49e-01 96.2% 94.4%
2ltkA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 46.0 3.88e-01 100.0% 66.0%
2in3A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 45.0 4.03e-01 100.0% 65.4%
1s3aA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 44.0 3.93e-01 100.0% 64.7%
3md7A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 38.0 2.56e-01 88.7% 48.5%
1r3nG01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.51 40.0 2.62e-01 100.0% 24.8%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947685 4038.1.1.1 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.92 85.0 5.42e-01 100.0% 23.6%
3948092 4038.1.1.0 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein 0.91 83.0 5.39e-01 100.0% 25.2%
3247200 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.78 67.0 5.26e-01 98.1% 59.1%
4950044 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.74 66.0 5.53e-01 100.0% 98.9%
4338175 2485.1.1.27 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › KaiB 0.73 63.0 5.02e-01 100.0% 59.1%
4652977 2485.1.1.27 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › KaiB 0.72 62.0 4.88e-01 100.0% 56.5%
4955873 2485.1.1.147 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF2703 0.71 61.0 4.89e-01 98.1% 99.0%
5011716 2485.1.1.34 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rdx 0.70 60.0 5.37e-01 98.1% 68.0%
3351733 2011.1.1.12 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Nicastrin 0.69 59.0 3.74e-01 100.0% 22.7%
4928819 301.6.1.0 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.68 59.0 4.78e-01 100.0% 53.3%
3587543 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.68 58.0 4.95e-01 100.0% 76.7%
4995396 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.68 56.0 4.32e-01 100.0% 41.5%
5058032 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.67 56.0 3.94e-01 98.1% 47.0%
3226787 2485.1.1.43 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 0.67 57.0 4.50e-01 100.0% 59.1%
3258997 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.67 56.0 4.49e-01 100.0% 48.7%
3658811 2484.1.1.26 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.67 49.0 3.79e-01 81.1% 40.0%
3595598 2485.1.1.43 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 0.66 55.0 4.42e-01 100.0% 56.5%
4955742 301.6.1.0 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.66 57.0 4.48e-01 100.0% 47.8%
3177200 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.66 55.0 3.49e-01 98.1% 18.2%
3972286 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 55.0 3.69e-01 98.1% 25.0%
5041554 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.65 53.0 4.58e-01 100.0% 60.0%
3479141 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.65 55.0 4.08e-01 100.0% 59.3%
3274735 301.13.1.2 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 0.65 54.0 3.99e-01 100.0% 36.9%
4945954 301.6.1.0 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.65 54.0 4.20e-01 100.0% 44.5%
4025265 3008.1.1.0 a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.65 53.0 4.32e-01 94.3% 71.4%
5060057 2485.2.1.0 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain 0.65 53.0 4.42e-01 100.0% 61.0%
4027998 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.64 54.0 3.98e-01 100.0% 41.3%
4955739 301.6.1.0 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.64 54.0 4.24e-01 100.0% 44.0%
3392088 2011.1.1.0 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases 0.64 53.0 3.43e-01 100.0% 24.5%
4950096 301.9.1.1 a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA 0.64 55.0 4.76e-01 100.0% 70.6%
343771 2485.1.1.27 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › KaiB 0.64 51.0 4.28e-01 100.0% 81.5%
3218188 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.64 52.0 4.15e-01 100.0% 58.4%
3917145 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.63 52.0 3.96e-01 100.0% 49.0%
3217557 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.63 54.0 4.06e-01 100.0% 45.7%
5036541 301.6.1.0 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.63 53.0 4.10e-01 100.0% 42.3%
5070870 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.63 53.0 4.42e-01 98.1% 71.0%
3407386 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.63 52.0 4.35e-01 100.0% 59.0%
3277250 2485.1.1.107 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF30536 0.63 53.0 4.51e-01 100.0% 73.7%
2417969 2485.1.1.52 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_15 0.63 53.0 3.72e-01 100.0% 76.6%
3516442 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.63 53.0 4.25e-01 100.0% 53.0%
3796052 315.1.1.1 a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › MIF 0.63 52.0 4.12e-01 98.1% 82.5%
3594778 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.62 51.0 4.16e-01 100.0% 54.8%
4995946 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.62 51.0 4.32e-01 98.1% 61.0%
4582327 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.62 50.0 3.80e-01 100.0% 45.2%
5082654 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.62 53.0 3.97e-01 100.0% 48.6%
4026241 2485.2.1.0 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain 0.62 50.0 4.14e-01 100.0% 57.3%
3182197 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.62 51.0 4.07e-01 100.0% 55.0%
5054359 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.61 50.0 3.61e-01 98.1% 38.2%
3576026 315.1.1.1 a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › MIF 0.61 50.0 4.80e-01 100.0% 96.9%
3244391 315.1.1.1 a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › MIF 0.61 49.0 3.96e-01 98.1% 80.8%
4988978 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.61 49.0 4.00e-01 100.0% 51.7%
3282888 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.61 49.0 3.89e-01 100.0% 44.6%
4983100 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.61 49.0 4.05e-01 100.0% 47.0%
4888978 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.60 49.0 4.10e-01 100.0% 57.5%
5045167 2485.1.1.38 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.60 48.0 4.18e-01 98.1% 65.3%
4975408 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.60 48.0 4.00e-01 100.0% 54.8%
165987 301.6.1.2 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › FtsZ_C 0.60 49.0 3.87e-01 100.0% 43.1%
4098681 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.60 49.0 3.66e-01 100.0% 60.0%
3715712 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.60 48.0 4.05e-01 100.0% 59.0%
3300991 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.60 48.0 3.92e-01 100.0% 50.8%
3177864 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.59 49.0 3.94e-01 100.0% 48.3%
3784169 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.59 47.0 4.04e-01 100.0% 51.0%
5029846 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.59 48.0 3.49e-01 100.0% 36.2%
3539254 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.59 48.0 3.81e-01 100.0% 48.5%
None 0.59 47.0 4.01e-01 100.0% 60.4%
3182395 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.59 49.0 4.15e-01 100.0% 55.0%
3881647 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.59 49.0 4.03e-01 100.0% 50.9%
2125196 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.59 46.0 4.02e-01 100.0% 52.5%
1759161 2485.1.1.53 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GluRS_N 0.59 48.0 4.46e-01 98.1% 71.4%
4611699 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.59 47.0 3.89e-01 100.0% 54.8%
3971044 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.58 47.0 3.65e-01 100.0% 40.3%
3182419 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.58 48.0 3.94e-01 100.0% 53.6%
5057686 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.58 47.0 3.64e-01 100.0% 37.9%
3516414 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.58 48.0 4.26e-01 100.0% 72.9%
3879171 2485.1.1.2 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GSHPx 0.58 45.0 3.36e-01 100.0% 60.0%
3497363 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.57 46.0 3.85e-01 100.0% 52.7%
3477027 2485.1.1.11 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Phosducin 0.57 46.0 3.24e-01 100.0% 28.1%
3670075 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.57 47.0 3.93e-01 100.0% 63.8%
3472875 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.57 47.0 3.60e-01 100.0% 41.4%
138359 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.57 47.0 3.70e-01 100.0% 44.9%
5064308 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.57 46.0 3.70e-01 100.0% 43.2%
3648443 301.6.1.0 a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like 0.57 46.0 3.70e-01 100.0% 42.4%
3288386 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.57 46.0 3.62e-01 100.0% 44.4%
6993 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.56 45.0 3.56e-01 100.0% 40.0%
3391758 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.55 44.0 3.36e-01 100.0% 41.9%
3288371 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.53 44.0 3.44e-01 100.0% 42.3%
4927840 301.7.1.1 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP 0.53 42.0 3.41e-01 100.0% 44.8%
5059094 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.51 40.0 3.11e-01 98.1% 69.3%