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NC_027394.1__YP_009152828.1__CPT_Pookie29__00029
Bact-VirNC_027394.1__YP_009152828.1__CPT_Pookie29__00029
Identity
- Accession:
- NC_027394 ↗
- Kingdom:
- phage
Quality
71.3
mean pLDDT
Taxonomy
TaxID: 1540093
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-68
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f9wA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.79 | 53.0 | 4.31e-01 | 100.0% | 39.8% |
| 3lhiA00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 52.0 | 3.59e-01 | 100.0% | 24.3% |
| 4xwwA02 | 3.40.50.10710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase | 0.68 | 48.0 | 3.72e-01 | 97.1% | 34.0% |
| 7bfpA01 | 3.40.50.10890 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 43.0 | 3.42e-01 | 92.6% | 34.0% |
| 2pk8A00 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.62 | 52.0 | 4.70e-01 | 97.1% | 68.1% |
| 3icoA00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 49.0 | 3.40e-01 | 98.5% | 25.0% |
| 3bqwA02 | 3.30.1930.10 | Alpha Beta › 2-Layer Sandwich › capsid protein of prophage fold › capsid protein of prophage domain | 0.62 | 54.0 | 4.32e-01 | 98.5% | 61.3% |
| 1iirA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.60 | 46.0 | 3.25e-01 | 85.3% | 52.9% |
| 3md7A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 46.0 | 3.10e-01 | 92.6% | 21.9% |
| 6i1dA02 | 3.40.50.10890 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 50.0 | 3.66e-01 | 97.1% | 63.6% |
| 3kd4A02 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.56 | 41.0 | 3.23e-01 | 79.4% | 73.8% |
| 6k6wC01 | 3.40.50.10710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase | 0.55 | 39.0 | 3.16e-01 | 91.2% | 34.9% |
| 3jb9X01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 3.33e-01 | 100.0% | 31.4% |
| 4ljyA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 46.0 | 3.20e-01 | 100.0% | 33.1% |
| 2a2fX01 | 1.10.357.30 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Exocyst complex subunit Sec15 C-terminal domain, N-terminal subdomain | 0.54 | 43.0 | 3.33e-01 | 89.7% | 92.8% |
| 2ragA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 48.0 | 3.04e-01 | 100.0% | 66.4% |
| 2qjwA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 45.0 | 3.43e-01 | 98.5% | 68.2% |
| 1y8oA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.53 | 44.0 | 3.31e-01 | 92.6% | 60.0% |
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 42.0 | 3.08e-01 | 97.1% | 34.1% |
| 7pcrA01 | 3.40.50.10710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase | 0.51 | 41.0 | 3.25e-01 | 92.6% | 59.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979608 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.68 | 53.0 | 4.33e-01 | 100.0% | 45.6% |
| 4017920 | 2007.1.14.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › DUF6579 | 0.65 | 49.0 | 3.90e-01 | 92.6% | 40.0% |
| 3938135 | 4193.1.1.0 ↗ | alpha arrays › RUN domain › RUN domain › RUN domain | 0.60 | 54.0 | 4.12e-01 | 100.0% | 95.5% |
| 4025618 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 50.0 | 3.37e-01 | 95.6% | 52.4% |
| 3848406 | 4193.1.1.1 ↗ | alpha arrays › RUN domain › RUN domain › RUN domain › RUN | 0.59 | 52.0 | 3.87e-01 | 100.0% | 89.4% |
| 4968883 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.58 | 47.0 | 4.85e-01 | 100.0% | 93.8% |
| 3261066 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.57 | 49.0 | 3.60e-01 | 98.5% | 59.5% |
| 4175225 | 2004.1.1.231 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNase_J_b_CASP | 0.56 | 49.0 | 3.72e-01 | 98.5% | 56.4% |
| 3594143 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 46.0 | 3.00e-01 | 94.1% | 21.5% |
| 3705794 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 47.0 | 3.42e-01 | 98.5% | 53.1% |
| 4255891 | 2007.6.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS_2 | 0.52 | 42.0 | 3.06e-01 | 88.2% | 90.8% |