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NC_027399.1__YP_010843145.1__ACQ27_gp261__00261
Bact-VirNC_027399.1__YP_010843145.1__ACQ27_gp261__00261
Identity
- Accession:
- NC_027399 ↗
- Kingdom:
- phage
Quality
78.0
mean pLDDT
Taxonomy
TaxID: 1439894
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-30
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gfuA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 47.0 | 3.42e-01 | 73.3% | 61.9% |
| 2qqrA02 | 3.10.330.70 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.67 | 53.0 | 4.65e-01 | 100.0% | 98.1% |
| 3tr9B00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.67 | 49.0 | 2.99e-01 | 100.0% | 63.7% |
| 1w2lA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.66 | 54.0 | 3.85e-01 | 96.7% | 34.0% |
| 2a4vA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 50.0 | 3.38e-01 | 100.0% | 57.4% |
| 4chkB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.65 | 51.0 | 3.80e-01 | 100.0% | 41.8% |
| 3ce2A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.63 | 44.0 | 4.25e-01 | 100.0% | 76.6% |
| 1vyiA00 | 1.20.120.820 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain | 0.61 | 42.0 | 3.21e-01 | 100.0% | 67.6% |
| 3hdcA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 44.0 | 3.11e-01 | 96.7% | 62.5% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.61 | 42.0 | 3.81e-01 | 100.0% | 73.8% |
| 5cmlA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 45.0 | 2.79e-01 | 100.0% | 34.2% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 47.0 | 3.30e-01 | 100.0% | 58.0% |
| 5owvD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 44.0 | 2.79e-01 | 100.0% | 15.8% |
| 1p9gA00 | 3.30.60.10 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Endochitinase-like | 0.58 | 43.0 | 4.08e-01 | 100.0% | 65.0% |
| 1ccwB02 | 3.90.970.10 | Alpha Beta › Alpha-Beta Complex › Glutamate mutase, C-terminal domain › | 0.58 | 44.0 | 3.69e-01 | 100.0% | 72.7% |
| 3e59B02 | 3.30.60.140 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.57 | 40.0 | 3.97e-01 | 93.3% | 97.4% |
| 2qr4A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.56 | 39.0 | 3.78e-01 | 100.0% | 76.6% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.56 | 40.0 | 2.56e-01 | 100.0% | 13.6% |
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.56 | 42.0 | 3.51e-01 | 90.0% | 50.0% |
| 5g5tA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 39.0 | 2.63e-01 | 96.7% | 18.0% |
| 1to6A02 | 3.90.1510.10 | Alpha Beta › Alpha-Beta Complex › Glycerate kinase, domain 2 › Glycerate kinase, domain 2 | 0.54 | 38.0 | 2.42e-01 | 100.0% | 27.5% |
| 4nnaA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 38.0 | 2.30e-01 | 100.0% | 22.0% |
| 2kswA01 | 3.30.1490.260 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.53 | 41.0 | 3.78e-01 | 100.0% | 67.4% |
| 3fgqA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 37.0 | 2.42e-01 | 86.7% | 66.5% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.53 | 40.0 | 2.94e-01 | 100.0% | 39.3% |
| 2la7A01 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 38.0 | 2.79e-01 | 100.0% | 85.9% |
| 3ebvA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 37.0 | 2.21e-01 | 93.3% | 9.2% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4091315 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.74 | 61.0 | 4.20e-01 | 100.0% | 98.2% |
| 4946461 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.74 | 57.0 | 3.52e-01 | 100.0% | 13.5% |
| 4965516 | 377.1.1.132 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF7561 | 0.73 | 57.0 | 4.58e-01 | 90.0% | 44.6% |
| 4669972 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.70 | 54.0 | 3.80e-01 | 96.7% | 25.5% |
| 4199672 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.69 | 51.0 | 3.90e-01 | 100.0% | 52.6% |
| 4050472 | 3674.1.1.1 ↗ | a+b duplicates or obligate multimers › Borealin C-terminal dimerization domain › Borealin C-terminal dimerization domain › Borealin C-terminal dimerization domain › Borealin | 0.68 | 48.0 | 4.54e-01 | 100.0% | 68.0% |
| 4950662 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.66 | 51.0 | 3.18e-01 | 100.0% | 16.2% |
| 3995866 | 210.1.3.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_2 | 0.65 | 51.0 | 3.18e-01 | 100.0% | 14.6% |
| 5028609 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.64 | 50.0 | 4.45e-01 | 100.0% | 64.0% |
| 5048337 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.63 | 52.0 | 3.34e-01 | 96.7% | 21.3% |
| 3572307 | 4.1.1.405 ↗ | beta barrels › SH3 › SH3 › SH3 › CCDC174_GRSR | 0.62 | 47.0 | 4.76e-01 | 90.0% | 90.0% |
| 3491054 | 7590.1.1.7 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › MID_MedPIWI | 0.62 | 46.0 | 3.09e-01 | 100.0% | 18.8% |
| None | — | 0.62 | 49.0 | 2.88e-01 | 100.0% | 10.0% | |
| 3514894 | 386.1.1.337 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › CCDC174_GRSR | 0.61 | 45.0 | 4.57e-01 | 90.0% | 90.0% |
| 5025086 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.61 | 47.0 | 4.15e-01 | 100.0% | 89.1% |
| 3516952 | 221.1.1.118 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DGKI | 0.60 | 46.0 | 3.32e-01 | 100.0% | 89.1% |
| 3484736 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 4.17e-01 | 96.7% | 96.0% |
| 3921046 | 3674.1.1.0 ↗ | a+b duplicates or obligate multimers › Borealin C-terminal dimerization domain › Borealin C-terminal dimerization domain › Borealin C-terminal dimerization domain | 0.59 | 38.0 | 3.88e-01 | 100.0% | 75.6% |
| 4094553 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 48.0 | 4.06e-01 | 100.0% | 100.0% |
| 3199044 | 5001.1.1.88 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › STE2 | 0.58 | 42.0 | 2.49e-01 | 86.7% | 34.3% |
| 3678933 | 7590.1.1.3 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid | 0.57 | 42.0 | 2.73e-01 | 100.0% | 96.2% |
| 4945555 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 39.0 | 3.96e-01 | 96.7% | 94.3% |
| 3994423 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.55 | 39.0 | 3.36e-01 | 90.0% | 63.3% |
| 3799786 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 2.71e-01 | 86.7% | 20.9% |
| 3597842 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.52 | 38.0 | 3.43e-01 | 100.0% | 100.0% |
| 3939702 | 269.1.1.9 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › PF29320 | 0.52 | 38.0 | 2.49e-01 | 100.0% | 21.2% |
| 4453821 | 3253.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA | 0.50 | 36.0 | 3.49e-01 | 100.0% | 100.0% |