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NC_027399.1__YP_010843175.1__ACQ27_gp291__00291

Bact-Vir

NC_027399.1__YP_010843175.1__ACQ27_gp291__00291

Identity

Accession:
NC_027399 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alcyoneusvirus› Klebsiella_phage_K64-1

TaxID: 1439894

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 52-102
PDB
Domain cluster: rep: KU574722.1__AMM44045.1__CBB_482__00482__D43-92
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r6iA01 3.30.2180.10 Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like 0.89 76.0 6.05e-01 100.0% 49.0%
2r31A01 3.30.2180.10 Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like 0.89 74.0 6.73e-01 100.0% 69.7%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.74 67.0 5.95e-01 100.0% 74.6%
5c17A00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.71 39.0 2.57e-01 100.0% 13.6%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.69 42.0 3.96e-01 82.4% 49.2%
2yrmA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.68 43.0 4.83e-01 78.4% 86.5%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 50.0 3.85e-01 100.0% 36.0%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 49.0 3.86e-01 100.0% 39.4%
2iz4A02 2.20.25.590 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.65 38.0 4.09e-01 74.5% 69.0%
7febA03 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.65 35.0 2.85e-01 86.3% 30.4%
1yuaA02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.64 45.0 4.37e-01 78.4% 65.5%
1wxrA03 3.30.160.280 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 55.0 4.86e-01 98.0% 75.0%
6cz7A01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.63 45.0 4.26e-01 76.5% 64.5%
1maeL00 2.60.30.10 Mainly Beta › Sandwich › Electron Transport Ethylamine Dehydrogenase › Methylamine/Aralkylamine dehydrogenase light chain 0.63 42.0 3.18e-01 70.6% 60.5%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 49.0 3.70e-01 100.0% 36.4%
2iv2X01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.62 44.0 4.37e-01 76.5% 70.9%
2napA01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.62 44.0 4.26e-01 76.5% 67.2%
1ogyA01 3.30.200.210 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.60 43.0 3.26e-01 76.5% 32.3%
3weeB03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.58 37.0 2.85e-01 100.0% 28.7%
2oa9B02 3.30.70.3570 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain 0.58 43.0 3.28e-01 82.4% 52.8%
3lifA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 38.0 3.18e-01 70.6% 38.9%
2fgtA03 3.30.310.160 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 0.58 49.0 3.71e-01 100.0% 45.2%
3us4A00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 45.0 3.82e-01 94.1% 67.0%
1iv0A00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.56 44.0 3.73e-01 100.0% 49.0%
3fogA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 44.0 3.77e-01 100.0% 84.3%
1whnA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 45.0 3.75e-01 98.0% 50.5%
3qokA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 37.0 3.07e-01 70.6% 64.9%
1aalB00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.55 42.0 4.11e-01 84.3% 86.0%
6q61A00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.55 43.0 4.12e-01 86.3% 84.7%
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 45.0 3.85e-01 100.0% 72.5%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.54 37.0 3.04e-01 100.0% 40.0%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 45.0 3.68e-01 100.0% 53.3%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 42.0 3.61e-01 98.0% 66.7%
1zxuA00 2.40.160.200 Mainly Beta › Beta Barrel › Porin › LURP1-related 0.53 37.0 2.77e-01 78.4% 93.2%
4ms4B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 44.0 3.09e-01 98.0% 27.2%
2d8iA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 43.0 3.78e-01 100.0% 69.3%
4dwsA01 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 36.0 2.72e-01 70.6% 73.2%
2ltsA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 42.0 3.76e-01 100.0% 59.3%
7uqyB01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 41.0 2.85e-01 96.1% 84.6%
3rv0B03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 42.0 3.81e-01 100.0% 74.7%
4qt4A00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.52 45.0 3.11e-01 100.0% 87.3%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 39.0 3.67e-01 88.2% 64.3%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.52 40.0 2.62e-01 92.2% 18.4%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 40.0 3.28e-01 94.1% 58.8%
1uwvA03 2.40.50.1070 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 34.0 2.65e-01 88.2% 25.5%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 42.0 3.36e-01 100.0% 91.0%
3hkoA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 42.0 2.83e-01 96.1% 41.2%
1ob8A00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.51 38.0 3.10e-01 88.2% 37.8%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.51 40.0 3.08e-01 100.0% 35.0%
2eobA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 40.0 3.35e-01 100.0% 54.9%
2kouA00 3.30.160.380 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain 0.51 41.0 3.45e-01 100.0% 54.9%
4l0mA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.51 44.0 2.90e-01 100.0% 69.1%
3gdoA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 42.0 2.86e-01 94.1% 78.4%
1i99I02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 42.0 3.33e-01 100.0% 91.5%
4bd9B01 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.50 38.0 3.82e-01 86.3% 94.4%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3495925 4351.1.1.0 ↗ alpha arrays › ATP12-like › ATP12-like › ATP12-like 0.89 82.0 5.13e-01 100.0% 21.7%
3211833 4351.1.1.1 ↗ alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 0.86 78.0 4.92e-01 100.0% 21.8%
3404585 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.80 61.0 6.15e-01 100.0% 82.0%
3497020 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.74 43.0 4.62e-01 78.4% 67.4%
3208203 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.74 41.0 4.04e-01 72.5% 50.9%
3935170 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.72 41.0 4.35e-01 72.5% 62.2%
3416458 386.1.1.259 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29169 0.72 54.0 5.72e-01 100.0% 93.3%
4256317 375.1.1.38 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Topo_Zn_Ribbon 0.69 49.0 4.78e-01 84.3% 69.1%
4004358 252.2.1.3 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_1 0.68 55.0 5.56e-01 100.0% 94.0%
3251948 375.1.3.2 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › MRNIP 0.67 47.0 4.50e-01 74.5% 100.0%
3842576 220.1.1.67 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.67 49.0 3.72e-01 100.0% 33.3%
3419779 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.66 39.0 4.51e-01 78.4% 96.7%
3165551 375.1.1.38 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Topo_Zn_Ribbon 0.66 47.0 4.50e-01 78.4% 65.5%
3189994 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.65 39.0 3.24e-01 72.5% 32.2%
3239607 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.64 39.0 4.34e-01 80.4% 85.7%
4028185 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.64 38.0 3.89e-01 72.5% 58.0%
3702861 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.63 38.0 3.78e-01 74.5% 54.5%
3791383 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 36.0 2.96e-01 98.0% 29.5%
943 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.62 48.0 3.90e-01 100.0% 44.0%
3623534 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 48.0 3.94e-01 100.0% 47.8%
5048417 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 37.0 3.57e-01 70.6% 51.7%
3585171 330.1.1.5 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.59 49.0 4.23e-01 100.0% 57.6%
3696699 376.1.1.125 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2, zf-RING_UBOX 0.56 44.0 3.08e-01 88.2% 91.8%
3616729 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.56 45.0 3.74e-01 98.0% 49.0%
3315568 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.55 47.0 4.33e-01 100.0% 80.0%
3268368 7022.1.1.1 ↗ alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT 0.54 42.0 2.47e-01 84.3% 92.4%
2855565 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 38.0 3.22e-01 76.5% 50.0%
4943785 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 47.0 3.47e-01 100.0% 90.7%
3177469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 41.0 3.75e-01 98.0% 62.9%
3768845 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.53 41.0 3.43e-01 92.2% 61.0%
4331289 244.2.1.5 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Reductase_C 0.53 40.0 3.86e-01 90.2% 98.5%
3737235 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.53 35.0 3.34e-01 74.5% 52.3%
4076504 7527.1.1.2 ↗ a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › CoA_transf_3 0.53 42.0 2.57e-01 94.1% 34.3%
3890058 358.1.1.3 ↗ a+b complex topology › SRCR-like › SRCR-like › SRCR-like › SRCR_2 0.52 42.0 3.52e-01 94.1% 83.2%
3500573 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.52 44.0 2.72e-01 100.0% 27.6%
2442052 5.1.3.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.51 40.0 3.04e-01 100.0% 33.6%
3452782 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.51 42.0 3.08e-01 100.0% 86.3%
138176 330.1.1.3 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.51 41.0 3.45e-01 100.0% 54.9%
3967506 300.1.1.8 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.51 39.0 2.59e-01 86.3% 72.5%
4216580 298.1.1.8 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C 0.50 42.0 2.79e-01 98.0% 74.8%
3261599 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.50 39.0 2.77e-01 96.1% 27.0%