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NC_027399.1__YP_010843356.1__ACQ27_gp472__00472

Bact-Vir

NC_027399.1__YP_010843356.1__ACQ27_gp472__00472

Identity

Accession:
NC_027399 ↗
Kingdom:
phage

Quality

59.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 57-138
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.80 73.0 5.75e-01 100.0% 72.4%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.77 69.0 6.80e-01 97.6% 97.7%
4mveA00 2.40.128.580 Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain 0.74 67.0 5.50e-01 100.0% 75.5%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.71 62.0 4.93e-01 96.3% 97.5%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.71 63.0 4.92e-01 100.0% 90.4%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.70 61.0 5.30e-01 98.8% 96.9%
3v8uA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.70 62.0 4.85e-01 100.0% 94.4%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.70 62.0 5.20e-01 98.8% 92.7%
5bp3B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.68 49.0 3.31e-01 74.4% 41.1%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 39.0 4.79e-01 75.6% 90.4%
4qwoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.67 55.0 4.70e-01 89.0% 73.5%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.66 52.0 4.98e-01 84.1% 89.4%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 57.0 4.69e-01 100.0% 64.3%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 54.0 4.42e-01 96.3% 57.7%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.62 47.0 3.62e-01 81.7% 77.8%
7zgmA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.62 54.0 3.86e-01 96.3% 82.4%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.62 53.0 5.19e-01 95.1% 100.0%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.61 50.0 5.04e-01 91.5% 98.8%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.61 55.0 4.79e-01 98.8% 81.1%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.61 53.0 5.13e-01 100.0% 95.7%
4bumX00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.61 54.0 3.70e-01 97.6% 95.4%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 44.0 3.28e-01 78.0% 96.3%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 51.0 4.36e-01 100.0% 82.9%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.60 48.0 4.59e-01 98.8% 74.5%
3v0rA01 2.40.350.20 Mainly Beta › Beta Barrel › AOC barrel-like › 0.60 47.0 4.26e-01 89.0% 74.2%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 42.0 2.90e-01 74.4% 28.9%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.59 33.0 4.16e-01 73.2% 97.8%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.59 43.0 3.88e-01 75.6% 78.2%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 43.0 3.11e-01 76.8% 79.6%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.59 53.0 4.70e-01 98.8% 77.1%
2prxA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 42.0 3.82e-01 79.3% 99.1%
2l8oA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 48.0 4.08e-01 96.3% 75.0%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 45.0 3.16e-01 86.6% 94.6%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.56 39.0 4.14e-01 86.6% 84.3%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 42.0 3.02e-01 80.5% 84.9%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.56 50.0 3.36e-01 98.8% 89.6%
1rypA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 50.0 3.53e-01 97.6% 65.4%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.56 43.0 4.34e-01 100.0% 83.7%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 42.0 2.98e-01 80.5% 85.3%
1iucA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.55 49.0 3.30e-01 98.8% 90.4%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.55 33.0 3.90e-01 100.0% 96.1%
3k25A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 43.0 3.07e-01 89.0% 83.7%
1a87A01 3.30.1120.60 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin 0.54 47.0 4.52e-01 100.0% 92.8%
1ry9A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 49.0 4.18e-01 100.0% 78.2%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.54 38.0 3.23e-01 73.2% 89.1%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.54 47.0 3.95e-01 98.8% 59.6%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.54 46.0 3.04e-01 96.3% 98.1%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.52 44.0 3.50e-01 95.1% 82.5%
5tkyA04 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.52 39.0 3.52e-01 80.5% 92.2%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.52 43.0 2.78e-01 91.5% 40.0%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.52 43.0 3.19e-01 90.2% 77.8%
2lm3A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.52 37.0 2.81e-01 75.6% 80.5%
3el6A00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.51 44.0 3.16e-01 100.0% 83.4%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 37.0 3.65e-01 95.1% 71.1%
3frnA01 3.10.129.70 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.51 41.0 3.49e-01 89.0% 77.7%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 32.0 3.57e-01 70.7% 82.8%
6oauA02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.50 38.0 3.45e-01 85.4% 83.6%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.50 45.0 2.96e-01 100.0% 72.7%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.50 39.0 2.70e-01 85.4% 27.6%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4097328 9.3.1.3 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C 0.76 69.0 5.96e-01 100.0% 96.8%
3273196 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.75 60.0 4.83e-01 84.1% 54.0%
3282568 9.20.1.1 beta barrels › Lipocalins/Streptavidin › Uncharacterized protein Tcur_1030 › Uncharacterized protein Tcur_1030 › GXWXG,DUF4334 0.75 65.0 5.07e-01 95.1% 80.0%
4971040 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.74 62.0 5.48e-01 90.2% 72.9%
4971345 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.74 59.0 5.50e-01 84.1% 73.0%
5065384 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.73 62.0 5.43e-01 90.2% 73.9%
5052949 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.73 60.0 5.17e-01 87.8% 68.8%
5048686 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.73 61.0 5.27e-01 90.2% 73.6%
5078711 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.73 57.0 5.04e-01 84.1% 62.5%
4946840 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.73 59.0 5.28e-01 87.8% 73.9%
4187379 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.72 59.0 5.18e-01 87.8% 72.5%
5047213 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.72 59.0 5.09e-01 87.8% 69.4%
3587732 9.6.1.0 beta barrels › Lipocalins/Streptavidin › Staphostatin › Staphostatin 0.72 64.0 5.76e-01 97.6% 94.5%
5073723 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.72 60.0 5.31e-01 91.5% 74.8%
2393360 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.71 59.0 5.22e-01 90.2% 72.3%
5048098 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.71 60.0 5.14e-01 90.2% 70.4%
3868838 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.71 64.0 5.07e-01 98.8% 69.4%
3715024 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.71 65.0 6.31e-01 100.0% 93.3%
2393363 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.70 59.0 4.95e-01 90.2% 72.8%
3564821 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.70 63.0 5.07e-01 98.8% 71.6%
5000056 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.70 60.0 5.23e-01 92.7% 75.0%
5048945 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.70 57.0 4.93e-01 87.8% 67.2%
3941288 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.70 62.0 5.13e-01 98.8% 95.9%
3267885 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.70 57.0 4.79e-01 87.8% 72.6%
4253589 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.69 58.0 4.94e-01 90.2% 70.8%
3062889 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.69 61.0 4.81e-01 98.8% 92.5%
136690 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.69 49.0 3.39e-01 75.6% 89.3%
4398256 5087.1.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.69 48.0 3.68e-01 72.0% 98.3%
3795930 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.68 61.0 5.12e-01 98.8% 94.2%
3624142 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.68 61.0 5.12e-01 100.0% 95.0%
3223544 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.67 54.0 4.83e-01 86.6% 84.3%
4000493 6129.1.1.9 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › RGM_C 0.67 53.0 4.10e-01 84.1% 84.0%
4951171 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.67 47.0 5.05e-01 81.7% 85.7%
3585414 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.66 57.0 5.10e-01 98.8% 68.2%
2881936 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.66 55.0 4.58e-01 92.7% 63.4%
4003932 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.65 59.0 5.15e-01 98.8% 73.3%
3960946 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.64 47.0 3.81e-01 76.8% 90.3%
3938627 9.11.1.0 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.64 48.0 5.00e-01 79.3% 92.0%
3791245 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.63 52.0 4.28e-01 90.2% 84.0%
185584 3385.1.1.1 beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 › AltA1 0.60 49.0 4.32e-01 92.7% 73.1%
4115428 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.60 53.0 4.14e-01 100.0% 81.1%
4927158 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 44.0 2.70e-01 78.0% 84.2%
4018988 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.59 50.0 4.31e-01 98.8% 85.0%
4055732 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.59 47.0 3.63e-01 86.6% 71.9%
2442052 5.1.3.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.59 42.0 3.45e-01 74.4% 80.4%
3228776 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 46.0 3.17e-01 85.4% 27.8%
3790336 5.1.3.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_Rol-3 0.58 43.0 3.10e-01 78.0% 83.8%
5059043 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 46.0 3.03e-01 86.6% 83.5%
3957726 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.57 47.0 3.68e-01 90.2% 87.8%
4937746 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 50.0 4.49e-01 97.6% 83.5%
5069874 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 40.0 3.28e-01 84.1% 40.0%
3365419 5.3.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.56 42.0 3.58e-01 98.8% 47.9%
3887377 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.56 49.0 3.35e-01 96.3% 38.2%
5036655 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 35.0 4.00e-01 85.4% 88.3%
3971583 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.56 42.0 3.53e-01 80.5% 67.1%
3807776 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 44.0 2.93e-01 86.6% 26.5%
3895377 331.9.1.7 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP5B1_C 0.53 46.0 3.99e-01 93.9% 65.6%
1107861 3513.1.1.1 a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA › DUF4853 0.52 44.0 3.50e-01 95.1% 82.5%
3275492 5.1.4.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 0.52 45.0 2.91e-01 98.8% 83.6%
3262446 331.4.1.1 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.52 43.0 4.21e-01 93.9% 91.4%
4984017 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.52 40.0 3.23e-01 82.9% 72.5%
3781182 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 46.0 2.93e-01 100.0% 94.7%
3500471 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.51 45.0 3.91e-01 100.0% 64.6%
4951804 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.51 46.0 3.85e-01 100.0% 95.7%
4946835 4019.1.1.1 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.50 40.0 2.67e-01 90.2% 20.6%