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NC_027399.1__YP_010843390.1__ACQ27_gp506__00506
Bact-VirNC_027399.1__YP_010843390.1__ACQ27_gp506__00506
Identity
- Accession:
- NC_027399 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Taxonomy
TaxID: 1439894
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-73
Domain cluster:
rep: MH494197.1__AXC38907.1__X__00195__D3-64
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h6pC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.66 | 41.0 | 4.54e-01 | 83.3% | 80.4% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 35.0 | 3.23e-01 | 100.0% | 44.4% |
| 3g2bA00 | 1.10.10.1150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) | 0.58 | 43.0 | 3.98e-01 | 83.3% | 62.2% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 46.0 | 3.15e-01 | 91.7% | 90.0% |
| 1xmcB03 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.56 | 43.0 | 3.30e-01 | 84.7% | 84.7% |
| 3obfA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 43.0 | 3.36e-01 | 91.7% | 88.1% |
| 2k89A00 | 3.10.20.870 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain | 0.53 | 40.0 | 3.93e-01 | 83.3% | 87.5% |
| 3fdfA02 | 6.10.140.550 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 32.0 | 3.52e-01 | 95.8% | 76.8% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 33.0 | 3.14e-01 | 86.1% | 53.5% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.52 | 41.0 | 3.54e-01 | 91.7% | 68.0% |
| 3zm6A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.51 | 43.0 | 3.16e-01 | 98.6% | 80.3% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 35.0 | 3.16e-01 | 95.8% | 51.0% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 35.0 | 2.83e-01 | 75.0% | 71.0% |
| 2uvaG01 | 1.20.1050.120 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 40.0 | 3.31e-01 | 88.9% | 69.9% |
| 2ap1A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 41.0 | 3.50e-01 | 100.0% | 95.7% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3782747 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.69 | 34.0 | 3.34e-01 | 84.7% | 42.5% |
| 4061485 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.62 | 44.0 | 3.34e-01 | 73.6% | 69.7% |
| 3629758 | 577.1.1.1 ↗ | alpha arrays › CRIB domain › CRIB domain › CRIB domain › PBD | 0.60 | 32.0 | 3.27e-01 | 87.5% | 52.1% |
| 3425526 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.60 | 50.0 | 3.75e-01 | 93.1% | 57.4% |
| 3264576 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.59 | 45.0 | 4.51e-01 | 83.3% | 98.7% |
| 3625974 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.59 | 51.0 | 4.80e-01 | 100.0% | 94.4% |
| 4644747 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.58 | 45.0 | 4.40e-01 | 87.5% | 87.5% |
| 3601768 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 46.0 | 3.11e-01 | 91.7% | 91.5% |
| 3408369 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.57 | 48.0 | 4.75e-01 | 94.4% | 96.0% |
| 3518991 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.56 | 46.0 | 4.57e-01 | 91.7% | 98.7% |
| 3544935 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.56 | 45.0 | 3.99e-01 | 91.7% | 76.4% |
| 4978264 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 38.0 | 3.43e-01 | 72.2% | 93.3% |
| 3939481 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.55 | 39.0 | 2.82e-01 | 77.8% | 52.7% |
| 3232510 | 3075.1.1.1 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › PFU | 0.55 | 42.0 | 4.16e-01 | 84.7% | 81.3% |
| 4610617 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.53 | 43.0 | 3.12e-01 | 91.7% | 93.2% |
| 3385764 | 4954.1.1.0 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit | 0.53 | 37.0 | 3.65e-01 | 100.0% | 70.7% |
| 4927548 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.52 | 41.0 | 3.53e-01 | 87.5% | 97.5% |
| 3316490 | 108.1.1.20 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like | 0.52 | 31.0 | 2.70e-01 | 98.6% | 41.0% |
| 3602836 | 284.1.3.6 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › DUF749 | 0.52 | 39.0 | 3.57e-01 | 83.3% | 87.0% |
| 5015408 | 4.8.1.50 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF749 | 0.51 | 40.0 | 3.77e-01 | 87.5% | 97.8% |
| 4485741 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 42.0 | 2.46e-01 | 94.4% | 42.9% |
| 3326759 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.50 | 39.0 | 3.87e-01 | 84.7% | 88.0% |
| 3787220 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.50 | 42.0 | 2.89e-01 | 93.1% | 85.8% |
| 3732775 | 2007.2.2.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › Ssu72 | 0.50 | 41.0 | 3.02e-01 | 98.6% | 72.0% |