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NC_027399.1__YP_010843542.1__ACQ27_gp658__00658
Bact-VirNC_027399.1__YP_010843542.1__ACQ27_gp658__00658
Identity
- Accession:
- NC_027399 ↗
- Kingdom:
- phage
Quality
74.8
mean pLDDT
Taxonomy
TaxID: 1439894
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-79
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.63 | 54.0 | 3.45e-01 | 100.0% | 32.2% |
| 1kz7C02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 44.0 | 3.64e-01 | 77.2% | 43.8% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 42.0 | 3.49e-01 | 72.2% | 45.4% |
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.59 | 43.0 | 3.97e-01 | 75.9% | 62.4% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.58 | 50.0 | 4.00e-01 | 97.5% | 57.7% |
| 3zm6A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.57 | 42.0 | 3.12e-01 | 79.7% | 35.4% |
| 1j8bA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.57 | 50.0 | 4.77e-01 | 100.0% | 84.8% |
| 2e8eA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 39.0 | 3.40e-01 | 82.3% | 44.7% |
| 1phkA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.56 | 45.0 | 3.47e-01 | 88.6% | 72.6% |
| 3f42A00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.55 | 49.0 | 4.62e-01 | 98.7% | 82.8% |
| 4gp0B02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 40.0 | 3.52e-01 | 77.2% | 72.4% |
| 6i18A04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 39.0 | 3.58e-01 | 75.9% | 79.4% |
| 3drnB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 38.0 | 3.14e-01 | 73.4% | 81.3% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.55 | 38.0 | 3.45e-01 | 89.9% | 54.3% |
| 1ybxA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.54 | 47.0 | 4.51e-01 | 97.5% | 85.7% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 43.0 | 3.91e-01 | 91.1% | 64.2% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 43.0 | 3.90e-01 | 91.1% | 66.0% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.31e-01 | 83.5% | 95.7% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.51 | 37.0 | 3.36e-01 | 92.4% | 56.0% |
| 6g4bA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 38.0 | 2.96e-01 | 88.6% | 36.8% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3976684 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.69 | 47.0 | 4.78e-01 | 73.4% | 70.0% |
| 4096246 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.68 | 40.0 | 4.33e-01 | 86.1% | 69.2% |
| 5076693 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.68 | 48.0 | 4.21e-01 | 74.7% | 50.8% |
| 3337373 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.67 | 45.0 | 3.37e-01 | 100.0% | 29.2% |
| 4969162 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.65 | 41.0 | 4.55e-01 | 74.7% | 83.3% |
| 3703118 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.63 | 56.0 | 5.22e-01 | 100.0% | 98.0% |
| 3895743 | 3615.1.1.7 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › CD20 | 0.63 | 49.0 | 3.78e-01 | 86.1% | 37.4% |
| 3882796 | 1021.1.1.2 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD | 0.63 | 42.0 | 4.13e-01 | 73.4% | 63.5% |
| 3604879 | 245.2.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB | 0.62 | 54.0 | 3.95e-01 | 97.5% | 45.0% |
| 5041715 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.61 | 48.0 | 4.36e-01 | 86.1% | 68.2% |
| 3604752 | 245.2.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB | 0.61 | 55.0 | 4.49e-01 | 100.0% | 62.1% |
| 4139864 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.61 | 53.0 | 4.99e-01 | 97.5% | 96.9% |
| 4236240 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.61 | 49.0 | 4.61e-01 | 87.3% | 98.9% |
| 4337520 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.60 | 53.0 | 4.92e-01 | 98.7% | 91.0% |
| 3359168 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.59 | 53.0 | 4.92e-01 | 100.0% | 79.0% |
| 3967100 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.59 | 42.0 | 2.95e-01 | 73.4% | 50.0% |
| 4944313 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 44.0 | 3.74e-01 | 93.7% | 47.4% |
| 3628286 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.58 | 40.0 | 3.41e-01 | 72.2% | 70.0% |
| 4197141 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.57 | 50.0 | 4.71e-01 | 100.0% | 79.0% |
| 3618540 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 39.0 | 4.04e-01 | 73.4% | 96.0% |
| 4047302 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.56 | 50.0 | 4.65e-01 | 100.0% | 79.0% |
| 4391637 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.56 | 48.0 | 4.64e-01 | 97.5% | 84.4% |
| 3283626 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.56 | 43.0 | 4.70e-01 | 100.0% | 100.0% |
| 4073557 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.55 | 39.0 | 3.61e-01 | 89.9% | 58.0% |
| 4143468 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.55 | 46.0 | 4.49e-01 | 94.9% | 94.4% |
| 4976401 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.55 | 46.0 | 3.73e-01 | 93.7% | 57.4% |
| 223484 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.55 | 38.0 | 3.45e-01 | 89.9% | 54.3% |
| 3823001 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.54 | 41.0 | 3.76e-01 | 84.8% | 90.0% |
| 3428250 | 2007.5.1.20 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase,PMR5N | 0.53 | 45.0 | 3.04e-01 | 98.7% | 56.3% |
| 4002544 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.53 | 40.0 | 2.47e-01 | 83.5% | 70.8% |
| 5014724 | 295.1.1.51 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C | 0.53 | 44.0 | 4.14e-01 | 93.7% | 90.0% |
| 5048237 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.53 | 35.0 | 3.07e-01 | 73.4% | 43.5% |
| 3384455 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.52 | 37.0 | 2.89e-01 | 74.7% | 95.1% |
| 4929483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 46.0 | 4.03e-01 | 100.0% | 79.2% |
| 3960596 | 245.2.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB | 0.52 | 42.0 | 4.14e-01 | 88.6% | 82.4% |
| 5014898 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 40.0 | 2.55e-01 | 86.1% | 40.7% |
| 3953440 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.51 | 40.0 | 2.91e-01 | 88.6% | 62.4% |