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NC_027399.1__YP_010843565.1__ACQ27_gp681__00681

Bact-Vir

NC_027399.1__YP_010843565.1__ACQ27_gp681__00681

Identity

Accession:
NC_027399 ↗
Kingdom:
phage

Quality

74.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-86
PDB
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.72 45.0 3.30e-01 83.1% 24.9%
6s6yD02 3.30.70.520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 39.0 2.99e-01 78.9% 25.2%
2i2lA01 2.10.70.50 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.67 36.0 4.13e-01 93.0% 71.2%
2k7iA01 3.30.160.160 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like 0.66 32.0 3.78e-01 71.8% 66.7%
4dt4A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 40.0 4.40e-01 84.5% 77.2%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 35.0 3.96e-01 71.8% 77.1%
2kr7A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 38.0 4.11e-01 88.7% 78.9%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 35.0 3.90e-01 73.2% 74.5%
3mxlA02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.58 47.0 4.16e-01 88.7% 96.2%
6gfaA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.57 31.0 3.36e-01 93.0% 62.5%
1feuA01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.56 44.0 4.07e-01 84.5% 100.0%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 33.0 3.40e-01 77.5% 60.6%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 43.0 3.83e-01 87.3% 70.2%
4s21B02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 34.0 2.88e-01 84.5% 38.7%
3n54B01 6.20.190.10 Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 0.53 33.0 3.47e-01 71.8% 70.5%
6qcbA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.52 35.0 3.18e-01 90.1% 49.5%
1y7eA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.51 43.0 2.98e-01 100.0% 74.1%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 36.0 3.68e-01 87.3% 77.5%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.50 33.0 3.24e-01 94.4% 61.0%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4123857 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.74 39.0 4.96e-01 78.9% 90.0%
3037102 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 40.0 4.26e-01 76.1% 61.3%
4505321 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.68 43.0 4.75e-01 88.7% 81.8%
4951165 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.68 39.0 4.40e-01 77.5% 74.5%
3670687 389.1.1.37 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › GUB_WAK_bind 0.67 38.0 2.95e-01 87.3% 26.7%
5033424 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.67 43.0 4.61e-01 88.7% 76.7%
4981303 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.66 40.0 4.41e-01 84.5% 78.2%
3231177 4.1.1.333 beta barrels › SH3 › SH3 › SH3 › PF29330 0.66 37.0 4.21e-01 76.1% 76.0%
4006301 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.65 41.0 4.52e-01 83.1% 81.8%
4523548 4.8.1.35 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 0.65 40.0 3.81e-01 81.7% 52.9%
3232445 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 37.0 4.00e-01 88.7% 66.7%
5064515 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.63 39.0 4.23e-01 88.7% 75.0%
5036381 284.4.1.1 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_IF 0.61 39.0 4.20e-01 84.5% 76.7%
2528374 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.60 40.0 3.97e-01 90.1% 63.6%
4269264 2.1.1.60 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.60 35.0 4.22e-01 77.5% 91.1%
4965392 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.58 31.0 3.58e-01 70.4% 72.0%
3588024 2.12.1.1 beta barrels › OB-fold › BC4932-like › BC4932-like › DUF1093 0.56 40.0 3.68e-01 76.1% 71.0%
3426675 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.55 31.0 3.35e-01 87.3% 64.4%
4171257 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 39.0 3.71e-01 74.6% 77.6%
3502668 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 36.0 3.80e-01 84.5% 75.4%
3251414 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 41.0 3.59e-01 83.1% 78.2%
5032200 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.53 40.0 3.56e-01 81.7% 66.7%
4080130 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 39.0 3.88e-01 81.7% 74.7%
3448896 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 37.0 3.49e-01 74.6% 71.1%
4422543 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 37.0 3.50e-01 76.1% 71.1%
3587975 2.12.1.1 beta barrels › OB-fold › BC4932-like › BC4932-like › DUF1093 0.51 40.0 3.40e-01 87.3% 52.5%
3282699 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.50 39.0 3.37e-01 84.5% 53.9%
D2 high residues 159-243
PDB
D3 high residues 923-995
PDB
D4 medium residues 252-335_428-488
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3eqnA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.81 75.0 5.55e-01 98.6% 52.6%
3eqnA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 73.0 5.35e-01 97.9% 58.3%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.79 74.0 4.93e-01 100.0% 30.3%
2pygA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 70.0 5.08e-01 95.2% 42.2%
1h80B00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 71.0 4.95e-01 97.2% 37.0%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 70.0 5.95e-01 95.9% 70.8%
1rmgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 71.0 4.95e-01 97.2% 34.1%
3zppA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 70.0 4.91e-01 96.6% 39.0%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 72.0 5.28e-01 100.0% 42.5%
7b7aA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 69.0 4.96e-01 95.2% 40.9%
3jurA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 69.0 4.80e-01 96.6% 44.8%
2uvfB02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 70.0 4.78e-01 97.2% 47.0%
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 68.0 4.64e-01 97.9% 36.2%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.72 49.0 4.82e-01 96.6% 64.3%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.71 50.0 4.91e-01 97.2% 66.5%
1k5cA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 64.0 4.81e-01 97.2% 50.5%
7dmkA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.68 61.0 4.74e-01 95.2% 46.5%
3n6zA01 2.160.20.110 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 60.0 4.94e-01 99.3% 85.3%
1o88A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.66 59.0 4.41e-01 97.2% 45.7%
1jtaA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 60.0 4.46e-01 100.0% 83.7%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.65 50.0 4.94e-01 99.3% 75.2%
5c1cA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 59.0 4.65e-01 100.0% 81.3%
4w8qA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.60 52.0 4.46e-01 94.5% 88.9%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941952 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.86 82.0 5.16e-01 100.0% 29.6%
4856184 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.81 75.0 5.42e-01 97.9% 58.4%
3191422 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.81 75.0 4.59e-01 98.6% 27.8%
3195366 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.80 74.0 5.32e-01 98.6% 56.4%
3206059 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.80 74.0 5.33e-01 98.6% 56.9%
4012052 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 74.0 5.45e-01 98.6% 49.7%
5082766 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.80 75.0 5.59e-01 100.0% 51.3%
3192323 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.79 71.0 5.94e-01 96.6% 88.7%
4527582 207.2.1.76 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Pect-lyase_RHGA_epim, Beta_helix 0.78 71.0 5.09e-01 96.6% 41.3%
4034497 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.78 70.0 5.10e-01 95.9% 39.5%
2546335 207.2.1.32 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › CatAgl_D2 0.77 71.0 5.00e-01 96.6% 38.6%
3373292 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.77 73.0 5.47e-01 100.0% 51.7%
3455716 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.76 70.0 5.15e-01 97.2% 46.3%
3987209 207.2.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3,Beta_helix 0.76 70.0 4.78e-01 97.9% 46.1%
3164978 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.75 69.0 5.12e-01 95.9% 42.1%
3674708 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.75 69.0 4.98e-01 97.9% 41.5%
4399371 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.74 69.0 4.81e-01 98.6% 36.1%
3419519 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.73 55.0 6.02e-01 95.2% 95.0%
3634222 207.4.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.73 50.0 4.89e-01 96.6% 63.7%
158287 207.4.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.71 50.0 4.84e-01 97.2% 64.0%
1714446 207.2.1.66 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › WcaM 0.71 67.0 4.53e-01 100.0% 31.9%
7216 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.70 64.0 4.81e-01 97.2% 50.5%
5058805 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.66 60.0 4.23e-01 99.3% 69.1%
4946338 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.65 59.0 4.62e-01 100.0% 74.2%
4021507 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.63 56.0 4.87e-01 97.9% 87.5%
1720156 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.59 41.0 4.71e-01 97.2% 100.0%
3599244 207.4.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like 0.54 49.0 4.65e-01 100.0% 98.8%
D5 medium residues 340-426
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hffA00 3.90.1720.70 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.73 48.0 3.93e-01 100.0% 38.1%
1kk1A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 51.0 4.76e-01 98.9% 93.7%
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.56 49.0 4.29e-01 98.9% 85.9%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 48.0 4.61e-01 100.0% 85.1%
2zxqA05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 47.0 3.73e-01 100.0% 90.4%
1wc2A00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.54 46.0 3.69e-01 96.6% 82.2%
2v5yA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 4.07e-01 92.0% 77.3%
2wanA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 34.0 3.41e-01 98.9% 62.5%
3l4cA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 39.0 3.18e-01 79.3% 49.4%
1uenA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 4.11e-01 100.0% 70.4%
2q7nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 4.28e-01 97.7% 82.7%
1flkA00 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.52 43.0 3.44e-01 98.9% 73.7%
1tvgA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 43.0 3.79e-01 95.4% 77.9%
4k4kA02 2.60.40.2630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 37.0 3.35e-01 78.2% 64.3%
2pfwA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 40.0 3.68e-01 100.0% 64.9%
1mkfA02 2.60.40.1340 Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like 0.51 44.0 3.62e-01 100.0% 91.9%
5u8rA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.97e-01 93.1% 81.5%
5fjqA00 2.70.50.50 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 0.51 44.0 3.57e-01 100.0% 63.3%
1lktA00 2.170.14.10 Mainly Beta › Beta Complex › Tailspike Protein; Chain › Phage P22 tailspike-like, N-terminal domain 0.51 36.0 3.44e-01 74.7% 80.8%
2hyxA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 44.0 3.86e-01 97.7% 96.2%
3fq4B01 2.60.40.2030 Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain 0.51 41.0 3.81e-01 92.0% 81.0%
4zxeC00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 42.0 3.69e-01 95.4% 79.4%
4hljA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 42.0 3.95e-01 100.0% 75.0%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 41.0 3.87e-01 93.1% 95.4%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5029089 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 52.0 4.64e-01 92.0% 87.2%
3728657 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 50.0 5.02e-01 87.4% 100.0%
5023972 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 48.0 4.89e-01 100.0% 87.1%
4971582 1.1.7.19 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.59 51.0 4.75e-01 98.9% 95.7%
2723599 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 52.0 4.67e-01 100.0% 91.0%
5042583 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.59 46.0 4.49e-01 100.0% 78.9%
5027634 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.58 40.0 3.82e-01 100.0% 61.0%
3266035 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.58 42.0 4.02e-01 77.0% 90.3%
3910809 11.10.1.10 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › PF28124 0.57 50.0 4.17e-01 100.0% 85.0%
3174357 4027.1.1.0 beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit 0.57 35.0 4.07e-01 80.5% 96.4%
5050767 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 45.0 4.28e-01 100.0% 70.9%
3219643 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.56 50.0 4.57e-01 100.0% 91.3%
4200056 11.14.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 › AglB_L1 0.56 41.0 3.66e-01 78.2% 65.6%
3515326 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.55 41.0 3.60e-01 79.3% 51.9%
5007276 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.55 46.0 3.98e-01 100.0% 57.9%
3727125 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 44.0 4.10e-01 92.0% 81.7%
4031118 10.12.1.100 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Polysacc_synt_C 0.55 37.0 3.41e-01 100.0% 51.3%
4013361 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.54 40.0 3.30e-01 79.3% 47.6%
3829376 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 40.0 3.47e-01 80.5% 61.4%
3196771 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.54 39.0 3.26e-01 79.3% 46.9%
5058553 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.03e-01 86.2% 85.7%
3391508 11.2.1.23 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › B9-C2 0.54 39.0 3.20e-01 79.3% 46.1%
3450207 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 4.38e-01 97.7% 100.0%
3448678 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 39.0 3.37e-01 79.3% 62.8%
3242673 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.99e-01 92.0% 78.3%
5045979 862.1.1.1 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.53 40.0 2.94e-01 83.9% 40.0%
3257581 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.52 43.0 3.68e-01 95.4% 85.7%
3619410 10.40.1.1 beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.52 45.0 3.62e-01 100.0% 48.6%
3508722 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 43.0 3.95e-01 95.4% 69.2%
3906556 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 40.0 3.28e-01 100.0% 41.1%
4663706 10.32.1.302 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF2712 0.52 45.0 4.14e-01 100.0% 75.7%
3568177 11.10.1.8 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › BTBD16_C 0.51 44.0 3.88e-01 100.0% 97.9%
4928383 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 36.0 3.64e-01 100.0% 72.2%
4028543 929.1.1.0 beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.51 38.0 3.97e-01 97.7% 92.0%
3605972 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 43.0 4.01e-01 100.0% 74.5%
3879431 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 4.18e-01 100.0% 81.0%
5010085 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 33.0 3.40e-01 75.9% 70.0%
3251814 10.32.1.241 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SAC9_GBDL_2nd 0.51 43.0 3.50e-01 100.0% 92.6%
3997163 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.51 39.0 3.88e-01 100.0% 79.8%
4574937 11.1.1.46 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha-amylase_N 0.51 44.0 3.98e-01 100.0% 71.2%
3507788 11.1.1.76 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GMP_PDE_delta 0.51 42.0 3.53e-01 94.3% 88.1%
3398840 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 43.0 4.10e-01 100.0% 81.0%
1871008 11.1.1.237 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 0.51 44.0 4.19e-01 100.0% 85.6%
1839907 10.32.1.54 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Thioredoxin_10 0.51 44.0 3.89e-01 98.9% 96.9%
3268650 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 43.0 3.80e-01 100.0% 98.6%
3824290 1.1.1.28 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N 0.50 40.0 2.74e-01 89.7% 38.3%
3478889 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 43.0 3.63e-01 100.0% 53.8%
1069108 10.2.1.58 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gp10-like 0.50 42.0 3.87e-01 100.0% 72.1%
D6 medium residues 489-563
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hg8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 73.0 4.65e-01 100.0% 25.8%
3zscA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 72.0 4.60e-01 100.0% 27.7%
1idjA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 66.0 4.22e-01 100.0% 39.0%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.71 62.0 4.54e-01 100.0% 36.5%
1af0A01 2.150.10.10 Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal 0.67 50.0 3.52e-01 100.0% 25.4%
1hf2A02 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 47.0 4.24e-01 100.0% 53.8%
4fx5A02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.52 44.0 3.42e-01 100.0% 84.2%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3342957 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.83 74.0 4.91e-01 100.0% 26.7%
5077579 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.81 68.0 4.25e-01 100.0% 19.1%
4969480 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.79 70.0 4.58e-01 100.0% 24.9%
4981313 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.79 68.0 4.67e-01 100.0% 29.2%
4940084 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.78 70.0 5.07e-01 100.0% 37.4%
4982073 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.78 70.0 4.45e-01 100.0% 21.8%
3965473 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.78 70.0 4.83e-01 100.0% 31.5%
4981702 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 65.0 4.14e-01 100.0% 19.7%
3261847 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.76 69.0 4.51e-01 100.0% 31.2%
4981475 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.76 69.0 4.49e-01 100.0% 25.1%
4969216 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.75 67.0 4.34e-01 100.0% 24.4%
3785316 207.4.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like 0.74 56.0 4.64e-01 100.0% 46.2%
4969187 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.73 68.0 4.69e-01 100.0% 33.9%
4981294 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.73 66.0 4.92e-01 100.0% 41.7%
3680585 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.73 66.0 4.59e-01 100.0% 34.0%
3873508 207.2.1.70 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix 0.69 63.0 3.77e-01 100.0% 18.4%
3260502 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.67 60.0 3.94e-01 100.0% 24.7%
4935713 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.65 44.0 3.91e-01 100.0% 47.0%
4025775 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.65 45.0 3.94e-01 100.0% 47.8%
3274687 207.2.1.73 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29740 0.64 55.0 4.10e-01 100.0% 48.8%
3271618 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.63 45.0 4.39e-01 100.0% 68.2%
3803729 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.61 34.0 3.60e-01 97.3% 60.0%
4976134 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.60 53.0 3.52e-01 100.0% 28.9%
5078382 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.59 51.0 3.47e-01 100.0% 39.0%
3174583 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.59 45.0 3.97e-01 100.0% 53.3%
4420723 1160.1.1.1 beta duplicates or obligate multimers › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › TGFBR3_N 0.59 46.0 3.93e-01 96.0% 50.8%